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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2getCOKPantothenate kinase2.7.1.33

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2getCOKPantothenate kinase2.7.1.331.000
2gesCOKPantothenate kinase2.7.1.330.571
2zsbADPPantothenate kinase2.7.1.330.566
4bfsZVSPantothenate kinase2.7.1.330.564
3af3GCPPantothenate kinase2.7.1.330.562
3af2ACPPantothenate kinase2.7.1.330.560
2gevCOKPantothenate kinase2.7.1.330.556
3af4GCPPantothenate kinase2.7.1.330.555
3af1GDPPantothenate kinase2.7.1.330.548
2zsdCOAPantothenate kinase2.7.1.330.543
2zsaADPPantothenate kinase2.7.1.330.542
3af0GDPPantothenate kinase2.7.1.330.533
3aezGDPPantothenate kinase2.7.1.330.530
2zs9ADPPantothenate kinase2.7.1.330.517
2zs8ADPPantothenate kinase2.7.1.330.508
2zseACPPantothenate kinase2.7.1.330.495
2geuCOKPantothenate kinase2.7.1.330.493
1esmCOAPantothenate kinase2.7.1.330.472
4bfxZVXPantothenate kinase2.7.1.330.457
4bftZVTPantothenate kinase2.7.1.330.454