Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2g27 | 4LG | Renin | 3.4.23.15 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
2g27 | 4LG | Renin | 3.4.23.15 | 1.000 | |
2fs4 | PZ1 | Renin | 3.4.23.15 | 0.610 | |
2g26 | 3LG | Renin | 3.4.23.15 | 0.610 | |
2bkt | RPF | Renin | 3.4.23.15 | 0.584 | |
3g72 | A6T | Renin | 3.4.23.15 | 0.569 | |
3k1w | BFX | Renin | 3.4.23.15 | 0.565 | |
3g70 | A5T | Renin | 3.4.23.15 | 0.564 | |
3oad | LPO | Renin | 3.4.23.15 | 0.559 | |
3oag | LPQ | Renin | 3.4.23.15 | 0.556 | |
3g6z | A7T | Renin | 3.4.23.15 | 0.540 | |
3oqk | S52 | Renin | 3.4.23.15 | 0.456 | |
2g21 | L1B | Renin | 3.4.23.15 | 0.449 | |
3vye | VYE | Renin | 3.4.23.15 | 0.448 | |
2i4q | UA4 | Renin | 3.4.23.15 | 0.443 | |
2g1o | 2IG | Renin | 3.4.23.15 | 0.442 | |
2iku | LIY | Renin | 3.4.23.15 | 0.441 |