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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2fzbTOLAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
2fzbTOLAldose reductase1.1.1.211.000
2pdlTOLAldose reductase1.1.1.210.718
1ah3TOLAldose reductase1.1.1.210.638
2pdh47DAldose reductase1.1.1.210.582
2pdfZSTAldose reductase1.1.1.210.570
4wevSUZAldo-keto reductase family 1 member B101.1.10.570
2fzdTOLAldose reductase1.1.1.210.566
1zuaTOLAldo-keto reductase family 1 member B101.1.10.556
5liu388Aldo-keto reductase family 1 member B101.1.10.517
3ld5LDTAldose reductase1.1.1.210.505
2bjsACVIsopenicillin N synthase1.21.3.10.504
4a16H34Acetylcholinesterase3.1.1.70.502
3f3y4OABile salt sulfotransferase2.8.2.140.495
1ry8RUTAldo-keto reductase family 1 member C3/0.494
1y2k7DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.494
3r8hZOMAldo-keto reductase family 1 member C3/0.494
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.493
2xi4AFTAcetylcholinesterase3.1.1.70.490
4phlPILPhosphodiesterase/0.490
2dv0ZSTAldose reductase1.1.1.210.489
1ry0PG2Aldo-keto reductase family 1 member C3/0.487
3m64393Aldose reductase1.1.1.210.486
4fam0SZAldo-keto reductase family 1 member C3/0.486
1zq5E04Aldo-keto reductase family 1 member C3/0.484
1xorZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.483
2i16LDTAldose reductase1.1.1.210.482
1odnAPVIsopenicillin N synthase1.21.3.10.481
1y2e5DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.481
1lkeDOGBilin-binding protein/0.480
1z3n3NAAldose reductase1.1.1.210.480
2pd9FIDAldose reductase1.1.1.210.480
3zkuHCVIsopenicillin N synthase1.21.3.10.480
1y2bDEEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.479
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.477
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.476
2ouu35GcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.476
3aivHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase, chloroplastic3.2.1.1820.476
4ajm3A6cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.476
1y2c3DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.475
2iqdLPAAldose reductase1.1.1.210.475
3u5ySCGRaucaffricine-O-beta-D-glucosidase3.2.1.1250.475
1kmsLIHDihydrofolate reductase1.5.1.30.474
1q5mNDPProstaglandin-E(2) 9-reductase1.1.1.1890.474
1zklIBMHigh affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A3.1.4.530.474
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.474
2pdq47DAldose reductase1.1.1.210.474
1xf0ASDAldo-keto reductase family 1 member C3/0.473
2pdn47DAldose reductase1.1.1.210.473
1tbbROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.472
1u65CP0Acetylcholinesterase3.1.1.70.472
3t0kDCQSulfide-quinone reductase/0.471
3dopNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.470
3wd9QPCcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.470
1gpnHUBAcetylcholinesterase3.1.1.70.469
2duzZSTAldose reductase1.1.1.210.469
2c94TSF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.468
2hzqSTRApolipoprotein D/0.468
2pdj393Aldose reductase1.1.1.210.468
2w6cBM4Acetylcholinesterase3.1.1.70.468
3r8gIZPAldo-keto reductase family 1 member C3/0.468
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.468
2fz8ZSTAldose reductase1.1.1.210.467
1u08PLPMethionine aminotransferase/0.466
1xonPILcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.466
2aot2PMHistamine N-methyltransferase2.1.1.80.466
2i17LDTAldose reductase1.1.1.210.466
3r43ID8Aldo-keto reductase family 1 member C3/0.466
4kp61S1cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.466
2pdiZSTAldose reductase1.1.1.210.465
2pzn393Aldose reductase1.1.1.210.465
2cekN8TAcetylcholinesterase3.1.1.70.464
2nvcITAAldose reductase1.1.1.210.464
3aiqHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1b, chloroplastic3.2.1.1820.464
1pwlBFIAldose reductase1.1.1.210.463
1w4lGL8Acetylcholinesterase3.1.1.70.463
3g58988cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.463
3p2vDOYAldose reductase1.1.1.210.463
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.463
4dbw511Aldo-keto reductase family 1 member C3/0.463
4ey6GNTAcetylcholinesterase3.1.1.70.463
4gca2X9Aldose reductase1.1.1.210.463
1ut6A8NAcetylcholinesterase3.1.1.70.462
2f3815MAldo-keto reductase family 1 member C3/0.462
2ikj393Aldose reductase1.1.1.210.462
2is72CLAldose reductase1.1.1.210.462
3g45988cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.462
3r6iJMSAldo-keto reductase family 1 member C3/0.462
1esmCOAPantothenate kinase2.7.1.330.461
2inzOHPAldose reductase1.1.1.210.461
3k4s0MOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.461
3lboLDTAldose reductase1.1.1.210.461
3m0iZSTAldose reductase1.1.1.210.461
5fd8A5APutative carboxypeptidase yocD/0.461
3ghwGHWDihydrofolate reductase1.5.1.30.460
3lqlLDTAldose reductase1.1.1.210.460
1qtiGNTAcetylcholinesterase3.1.1.70.459
1t7o152Carnitine O-acetyltransferase2.3.1.70.459
1votHUPAcetylcholinesterase3.1.1.70.459
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.459
2a58RBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.459
2pdwFIDAldose reductase1.1.1.210.459
2poqISDTrans-1,2-dihydrobenzene-1,2-diol dehydrogenase1.3.1.200.459
2tprFADTrypanothione reductase1.8.1.120.459
3gyf51PDihydrofolate reductase1.5.1.30.459
3u57DH8Raucaffricine-O-beta-D-glucosidase3.2.1.1250.459
3ugrIMNAldo-keto reductase family 1 member C3/0.459
4arbC57Acetylcholinesterase3.1.1.70.459
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.459
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.458
1lnmDTXBilin-binding protein/0.458
1y2d4DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.458
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.458
2pdbZSTAldose reductase1.1.1.210.458
2w3mFOLDihydrofolate reductase1.5.1.30.458
2wjoQUDBeta-secretase 13.4.23.460.458
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.458
3d3p20AcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.458
3d4bDZDNAD-dependent protein deacetylase/0.458
3g493G4Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.458
1e1fPSG4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.457
1e66HUXAcetylcholinesterase3.1.1.70.457
2j9fTHV2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial1.2.4.40.457
2j9fTHV2-oxoisovalerate dehydrogenase subunit beta, mitochondrial1.2.4.40.457
3aosJH2Hemolymph juvenile hormone binding protein/0.457
3bv7NAP3-oxo-5-beta-steroid 4-dehydrogenase/0.457
3c72CX1Geranylgeranyl transferase type-2 subunit beta2.5.1.600.457
3s3gTLTAldose reductase1.1.1.210.457
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.457
3zv7NHGAcetylcholinesterase3.1.1.70.457
4llkMEWcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.457
1pqc444Oxysterols receptor LXR-beta/0.456
2b04CHOPhospholipase A2, major isoenzyme3.1.1.40.456
2pdkSBIAldose reductase1.1.1.210.456
3lenZSTAldose reductase1.1.1.210.456
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.456
4lm4JPZcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.456
4muw2F4cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.456
4rh10TTSpore photoproduct lyase/0.456
4wbdADPPutative cysteine ligase BshC/0.456
2hvoZSTAldose reductase1.1.1.210.455
3pz3PZ3Geranylgeranyl transferase type-2 subunit beta2.5.1.600.455
3uzwNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.455
3v35NTIAldose reductase1.1.1.210.455
4ajdF04cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.455
1z4iUMP5'(3')-deoxyribonucleotidase, mitochondrial3.1.30.454
2duxZSTAldose reductase1.1.1.210.454
2h3wHC5Carnitine O-acetyltransferase2.3.1.70.454
3ghvGHCDihydrofolate reductase1.5.1.30.454
3mb9ZSTAldose reductase1.1.1.210.454
4mvh2F5cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.454
1q9mROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.453
1rxjBNIStreptavidin/0.453
1uhjCZBAequorin-2/0.453
2aj4ANPGalactokinase2.7.1.60.453
2aotSAHHistamine N-methyltransferase2.1.1.80.453
2j7cIDEBeta-glucosidase A3.2.1.210.453
2pd5ZSTAldose reductase1.1.1.210.453
3hxbBD5Geranylgeranyl transferase type-2 subunit beta2.5.1.600.453
4yu153NAldose reductase1.1.1.210.453
1ef3FIDAldose reductase1.1.1.210.452
1s1rNAPAldo-keto reductase family 1 member C3/0.452
2pdmZSTAldose reductase1.1.1.210.452
3iakEV1cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
3l3lL3LPoly [ADP-ribose] polymerase 12.4.2.300.452
3n0hTOPDihydrofolate reductase1.5.1.30.452
3sl6JN8cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
3tvxPNXcAMP-specific 3',5'-cyclic phosphodiesterase 4A3.1.4.530.452
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.452
4m6l21VDihydrofolate reductase1.5.1.30.452
4pnmNU1Tankyrase-22.4.2.300.452
2fz9ZSTAldose reductase1.1.1.210.451
2j7dGI1Beta-glucosidase A3.2.1.210.451
2q153MRBeta-secretase 13.4.23.460.451
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.451
3g4kROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.451
3ghrLDTAldose reductase1.1.1.210.451
3uzxAOM3-oxo-5-beta-steroid 4-dehydrogenase/0.451
4jpg1OXPyruvate kinase PKM2.7.1.400.451
4u95MIYMultidrug efflux pump subunit AcrB/0.451
2fm0M98cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
2vrjNCWBeta-glucosidase A3.2.1.210.450
3fapARDPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.450
3fapARDSerine/threonine-protein kinase mTOR2.7.11.10.450
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.450
4ddl0JQcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.450
1bk0ACVIsopenicillin N synthase1.21.3.10.449
1s36CEIObelin/0.449
2pdp393Aldose reductase1.1.1.210.449
2y6fM9FIsopenicillin N synthase1.21.3.10.449
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.449
3mc5393Aldose reductase1.1.1.210.449
3zj7C1KStrictosidine-O-beta-D-glucosidase3.2.1.1050.449
4drjRAPSerine/threonine-protein kinase mTOR2.7.11.10.449
4drjRAPPeptidyl-prolyl cis-trans isomerase FKBP45.2.1.80.449
4ey7E20Acetylcholinesterase3.1.1.70.449
4g2yNI5cGMP-specific 3',5'-cyclic phosphodiesterase/0.449
1dpmEBPParathion hydrolase3.1.8.10.448
1eveE20Acetylcholinesterase3.1.1.70.448
1lqaNDPProtein tas/0.448
1w6rGNTAcetylcholinesterase3.1.1.70.448
2pdxZSTAldose reductase1.1.1.210.448
3qpoPFRcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
3v94WYQPhosphodiesterase/0.448
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.448
4oex5EOcGMP-specific 3',5'-cyclic phosphodiesterase/0.448
1yc2NADNAD-dependent protein deacylase 2/0.447
1z8962PAldose reductase1.1.1.210.447
2gyuHI6Acetylcholinesterase3.1.1.70.447
3a1l2CCCytochrome P450/0.447
3sl8JN7cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.447
3sni546cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.447
3w5uFADFerredoxin/0.447
4h7c10HAldo-keto reductase family 1 member C3/0.447
4kxjP34Nucleoprotein/0.447
1isgAGSADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 23.2.2.60.446
1pq944BOxysterols receptor LXR-beta/0.446
1ro6ROLcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.446
1xomCIOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.446
3sn7540cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.446
1ekoI84Aldose reductase1.1.1.210.445
1fapRAPPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.445
1fapRAPSerine/threonine-protein kinase mTOR2.7.11.10.445
1t41ID5Aldose reductase1.1.1.210.445
2qw8NAPEugenol synthase 11.1.1.3180.445
2xupTZ5Acetylcholinesterase3.1.1.70.445
2xvw9NRSerum albumin/0.445
3c3dFO12-phospho-L-lactate transferase/0.445
3ghsLDTAldose reductase1.1.1.210.445
3nu03TUDihydrofolate reductase1.5.1.30.445
4hmn16JAldo-keto reductase family 1 member C3/0.445
4i9z5BAcGMP-specific 3',5'-cyclic phosphodiesterase/0.445
4ia05BBcGMP-specific 3',5'-cyclic phosphodiesterase/0.445
4li61XOTankyrase-12.4.2.300.445
1hb1OCVIsopenicillin N synthase1.21.3.10.444
1paxDHQPoly [ADP-ribose] polymerase 12.4.2.300.444
2iki388Aldose reductase1.1.1.210.444
2xufTZ4Acetylcholinesterase3.1.1.70.444
3b9oFMNAlkane monoxygenase/0.444
3pn1IVHDNA ligase/0.444
3zkyWT4Isopenicillin N synthase1.21.3.10.444
4kbyC2EStimulator of interferon genes protein/0.444
1dx6GNTAcetylcholinesterase3.1.1.70.443
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.443
1oynROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
2wo7ASVIsopenicillin N synthase1.21.3.10.443
2y0jAXCcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.443
3exhTPPPyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial1.2.4.10.443
3exhTPPPyruvate dehydrogenase E1 component subunit beta, mitochondrial1.2.4.10.443
3h4vDVPPteridine reductase 11.5.1.330.443
3ituIBMcGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.443
3uicNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.443
3uweVJJAldo-keto reductase family 1 member C3/0.443
4glx0XSDNA ligase6.5.1.20.443
4mm48PRNa(+):neurotransmitter symporter (Snf family)/0.443
1ohkCOPDihydrofolate reductase1.5.1.30.442
1synF89Thymidylate synthase/0.442
1zgbA1EAcetylcholinesterase3.1.1.70.442
2aouCQAHistamine N-methyltransferase2.1.1.80.442
2hxzH7JCathepsin S3.4.22.270.442
2rd678PPoly [ADP-ribose] polymerase 12.4.2.300.442
3c3xNAPEugenol synthase 11.1.1.3180.442
3dylPCGHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.442
3fvuIACKynurenine--oxoglutarate transaminase 12.6.1.70.442
3hxdBD7Geranylgeranyl transferase type-2 subunit beta2.5.1.600.442
3l3rOAGDihydrofolate reductase1.5.1.30.442
3lz5LDTAldose reductase1.1.1.210.442
3o56ZG1cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.442
4ajfF03cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.442
4araC56Acetylcholinesterase3.1.1.70.442
4s1hADPPyridoxal kinase, putative/0.442
1e6zNGOChitinase/0.441
1s2cFLFAldo-keto reductase family 1 member C3/0.441
1sojIBMcGMP-inhibited 3',5'-cyclic phosphodiesterase B3.1.4.170.441
2ea4F79Methionine aminopeptidase 2/0.441
2fpcSCGStrictosidine synthase4.3.3.20.441
2vbpVB1Isopenicillin N synthase1.21.3.10.441
2xlpNAPPutative flavin-containing monooxygenase/0.441
3bxoUPPdTDP-3-amino-3,4,6-trideoxy-alpha-D-glucopyranose/0.441
3dvaTPWPyruvate dehydrogenase E1 component subunit alpha1.2.4.10.441
3dvaTPWPyruvate dehydrogenase E1 component subunit beta1.2.4.10.441
3hxeBD8Geranylgeranyl transferase type-2 subunit beta2.5.1.600.441
3ntqNADInositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase1.1.1.180.441
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.441
4kak06UDihydrofolate reductase1.5.1.30.441
4l0qNADAlcohol dehydrogenase class-3/0.441
4yfy1YJVioF/0.441
1sjwNGVNogalonic acid methyl ester cyclase/0.440
1tytFADTrypanothione reductase1.8.1.120.440
1y60H4M5,6,7,8-tetrahydromethanopterin hydro-lyase4.2.1.1470.440
2f2kTGGAldose reductase1.1.1.210.440
2ipiAKYAclacinomycin-N/aclacinomycin-A oxidase/0.440
3af2ACPPantothenate kinase2.7.1.330.440
3nytULPUDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase2.6.1.980.440
3q7fED2Uncharacterized protein/0.440
4a1oAMZBifunctional purine biosynthesis protein PurH2.1.2.30.440
4heu15JcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.440
4l6s1WQPoly [ADP-ribose] polymerase 12.4.2.300.440
4tvj09LPoly [ADP-ribose] polymerase 22.4.2.300.440