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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2eniSAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2eniSAHDiphthine synthase/1.000
2p6dSAHDiphthine synthase/0.777
2ehlSAHDiphthine synthase/0.760
2ejkSAHDiphthine synthase/0.753
2p5cSAHDiphthine synthase/0.745
2dxwSAHDiphthine synthase/0.725
2e8sSAHDiphthine synthase/0.723
2p5fSAHDiphthine synthase/0.717
2dv7SAHDiphthine synthase/0.715
2dxvSAHDiphthine synthase/0.709
2emrSAHDiphthine synthase/0.709
2pb5SAHDiphthine synthase/0.705
2p6kSAHDiphthine synthase/0.703
2dsiSAHDiphthine synthase/0.702
2ed5SAHDiphthine synthase/0.694
2eleSAHDiphthine synthase/0.692
2e7rSAHDiphthine synthase/0.690
2eh5SAHDiphthine synthase/0.690
2emuSAHDiphthine synthase/0.682
2dsgSAHDiphthine synthase/0.674
2ekaSAHDiphthine synthase/0.673
2p6iSAHDiphthine synthase/0.673
2pcgSAHDiphthine synthase/0.670
2owkSAHDiphthine synthase/0.669
2p2xSAHDiphthine synthase/0.669
2dv4SAHDiphthine synthase/0.668
2dxxSAHDiphthine synthase/0.659
2egsSAHDiphthine synthase/0.658
2pcmSAHDiphthine synthase/0.654
2el0SAHDiphthine synthase/0.652
2pckSAHDiphthine synthase/0.650
2e08SAHDiphthine synthase/0.647
2eeqSAHDiphthine synthase/0.647
2e8qSAHDiphthine synthase/0.634
2e8rSAHDiphthine synthase/0.633
2egbSAHDiphthine synthase/0.626
1wngSAHDiphthine synthase/0.619
2eh2SAHDiphthine synthase/0.619
2eglSAHDiphthine synthase/0.618
2ek7SAHDiphthine synthase/0.618
2owuSAHDiphthine synthase/0.618
2el3SAHDiphthine synthase/0.616
2owgSAHDiphthine synthase/0.616
2ejjSAHDiphthine synthase/0.612
2pb6SAHDiphthine synthase/0.611
2e8hSAHDiphthine synthase/0.610
2pb4SAHDiphthine synthase/0.600
2dv5SAHDiphthine synthase/0.589
2e17SAHDiphthine synthase/0.586
2ek2SAHDiphthine synthase/0.586
2huvSAHDiphthine synthase/0.586
2e07SAHDiphthine synthase/0.582
2huxSAHDiphthine synthase/0.580
2z6rSAHDiphthine synthase/0.579
2e4nSAHDiphthine synthase/0.578
2eldSAHDiphthine synthase/0.578
1vceSAHDiphthine synthase/0.575
2hutSAHDiphthine synthase/0.569
2dv3SAHDiphthine synthase/0.567
2p9dSAHDiphthine synthase/0.567
2owvSAHDiphthine synthase/0.566
2eh4SAHDiphthine synthase/0.565
2pciSAHDiphthine synthase/0.561
2dekSAHDiphthine synthase/0.557
2en5SAHDiphthine synthase/0.556
2pchSAHDiphthine synthase/0.555
2e15SAHDiphthine synthase/0.553
2hr8SAHDiphthine synthase/0.550
2e16SAHDiphthine synthase/0.547
2ek3SAHDiphthine synthase/0.544
2pcaSAHDiphthine synthase/0.534
2p6lSAHDiphthine synthase/0.533
2dshSAHDiphthine synthase/0.527
2ek4SAHDiphthine synthase/0.519
2huqSAHDiphthine synthase/0.517
2owfSAHDiphthine synthase/0.512
2ed3SAHDiphthine synthase/0.502
2ejzSAHDiphthine synthase/0.449