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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2eleSAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2eleSAHDiphthine synthase/1.000
2e8rSAHDiphthine synthase/0.821
2p6dSAHDiphthine synthase/0.816
2pcgSAHDiphthine synthase/0.802
2ehlSAHDiphthine synthase/0.786
2owkSAHDiphthine synthase/0.784
2e7rSAHDiphthine synthase/0.751
2el3SAHDiphthine synthase/0.731
2eh2SAHDiphthine synthase/0.718
2eniSAHDiphthine synthase/0.713
2owgSAHDiphthine synthase/0.692
2ekaSAHDiphthine synthase/0.688
2emrSAHDiphthine synthase/0.683
2eh5SAHDiphthine synthase/0.671
2ejkSAHDiphthine synthase/0.669
2p5fSAHDiphthine synthase/0.669
2huvSAHDiphthine synthase/0.668
2egbSAHDiphthine synthase/0.665
2e08SAHDiphthine synthase/0.664
2e8sSAHDiphthine synthase/0.658
2p2xSAHDiphthine synthase/0.658
2eldSAHDiphthine synthase/0.647
2p5cSAHDiphthine synthase/0.646
2dxvSAHDiphthine synthase/0.645
2e4nSAHDiphthine synthase/0.639
2dxxSAHDiphthine synthase/0.634
2emuSAHDiphthine synthase/0.634
2pckSAHDiphthine synthase/0.633
2dxwSAHDiphthine synthase/0.629
2egsSAHDiphthine synthase/0.629
2pb5SAHDiphthine synthase/0.629
2pcmSAHDiphthine synthase/0.615
2hutSAHDiphthine synthase/0.613
2dsiSAHDiphthine synthase/0.602
2dv7SAHDiphthine synthase/0.602
2ek3SAHDiphthine synthase/0.600
2p6kSAHDiphthine synthase/0.600
2dv5SAHDiphthine synthase/0.593
1vceSAHDiphthine synthase/0.592
2ek7SAHDiphthine synthase/0.591
2p9dSAHDiphthine synthase/0.590
2ek4SAHDiphthine synthase/0.589
2ed5SAHDiphthine synthase/0.586
2pchSAHDiphthine synthase/0.586
2p6iSAHDiphthine synthase/0.583
2hr8SAHDiphthine synthase/0.582
2ek2SAHDiphthine synthase/0.580
2dv3SAHDiphthine synthase/0.576
2pciSAHDiphthine synthase/0.574
2e16SAHDiphthine synthase/0.568
2pb6SAHDiphthine synthase/0.567
2dv4SAHDiphthine synthase/0.564
2e15SAHDiphthine synthase/0.563
2dsgSAHDiphthine synthase/0.562
2el0SAHDiphthine synthase/0.562
2owvSAHDiphthine synthase/0.552
2eglSAHDiphthine synthase/0.551
2pb4SAHDiphthine synthase/0.551
2huxSAHDiphthine synthase/0.549
2huqSAHDiphthine synthase/0.547
2owuSAHDiphthine synthase/0.547
2e8qSAHDiphthine synthase/0.544
2eh4SAHDiphthine synthase/0.543
2pcaSAHDiphthine synthase/0.542
2e17SAHDiphthine synthase/0.541
2owfSAHDiphthine synthase/0.538
1wngSAHDiphthine synthase/0.537
2z6rSAHDiphthine synthase/0.534
2dekSAHDiphthine synthase/0.526
2e8hSAHDiphthine synthase/0.525
2en5SAHDiphthine synthase/0.523
2e07SAHDiphthine synthase/0.505
2ejjSAHDiphthine synthase/0.501
2ed3SAHDiphthine synthase/0.498
2eeqSAHDiphthine synthase/0.491
2dshSAHDiphthine synthase/0.489
2p6lSAHDiphthine synthase/0.485
2ejzSAHDiphthine synthase/0.478