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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2eldSAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2eldSAHDiphthine synthase/1.000
2el3SAHDiphthine synthase/0.847
2e4nSAHDiphthine synthase/0.804
2pb6SAHDiphthine synthase/0.785
2e8rSAHDiphthine synthase/0.769
2pcgSAHDiphthine synthase/0.763
2ek4SAHDiphthine synthase/0.759
2huvSAHDiphthine synthase/0.737
2dv3SAHDiphthine synthase/0.732
2pchSAHDiphthine synthase/0.726
2huxSAHDiphthine synthase/0.714
2e7rSAHDiphthine synthase/0.710
2eleSAHDiphthine synthase/0.706
2pckSAHDiphthine synthase/0.698
2owgSAHDiphthine synthase/0.695
2dxxSAHDiphthine synthase/0.690
2ek2SAHDiphthine synthase/0.679
2emuSAHDiphthine synthase/0.678
2e8qSAHDiphthine synthase/0.674
2p9dSAHDiphthine synthase/0.673
2z6rSAHDiphthine synthase/0.667
2pb5SAHDiphthine synthase/0.666
2pcaSAHDiphthine synthase/0.665
2eh4SAHDiphthine synthase/0.664
2huqSAHDiphthine synthase/0.663
2en5SAHDiphthine synthase/0.654
2dsgSAHDiphthine synthase/0.650
2emrSAHDiphthine synthase/0.649
2eh5SAHDiphthine synthase/0.648
2e07SAHDiphthine synthase/0.647
2owkSAHDiphthine synthase/0.646
2p6lSAHDiphthine synthase/0.643
2eniSAHDiphthine synthase/0.642
2e15SAHDiphthine synthase/0.639
1wngSAHDiphthine synthase/0.637
2p6iSAHDiphthine synthase/0.635
2p6dSAHDiphthine synthase/0.634
1vceSAHDiphthine synthase/0.633
2eh2SAHDiphthine synthase/0.632
2dekSAHDiphthine synthase/0.630
2ek7SAHDiphthine synthase/0.630
2ehlSAHDiphthine synthase/0.629
2e17SAHDiphthine synthase/0.628
2hutSAHDiphthine synthase/0.626
2e08SAHDiphthine synthase/0.625
2dv5SAHDiphthine synthase/0.622
2p5cSAHDiphthine synthase/0.619
2ekaSAHDiphthine synthase/0.617
2hr8SAHDiphthine synthase/0.611
2el0SAHDiphthine synthase/0.608
2dshSAHDiphthine synthase/0.606
2dv4SAHDiphthine synthase/0.606
2egbSAHDiphthine synthase/0.605
2pb4SAHDiphthine synthase/0.604
2ejjSAHDiphthine synthase/0.601
2ek3SAHDiphthine synthase/0.601
2dv7SAHDiphthine synthase/0.600
2dxvSAHDiphthine synthase/0.600
2dxwSAHDiphthine synthase/0.599
2e16SAHDiphthine synthase/0.598
2ed5SAHDiphthine synthase/0.590
2p5fSAHDiphthine synthase/0.590
2e8sSAHDiphthine synthase/0.589
2e8hSAHDiphthine synthase/0.583
2ejkSAHDiphthine synthase/0.580
2pcmSAHDiphthine synthase/0.580
2pciSAHDiphthine synthase/0.578
2ed3SAHDiphthine synthase/0.577
2owvSAHDiphthine synthase/0.565
2eglSAHDiphthine synthase/0.561
2dsiSAHDiphthine synthase/0.550
2p2xSAHDiphthine synthase/0.544
2eeqSAHDiphthine synthase/0.539
2owuSAHDiphthine synthase/0.539
2egsSAHDiphthine synthase/0.535
2p6kSAHDiphthine synthase/0.534
2owfSAHDiphthine synthase/0.530
2ejzSAHDiphthine synthase/0.501