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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2e8sSAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2e8sSAHDiphthine synthase/1.000
2p6kSAHDiphthine synthase/0.714
2dxwSAHDiphthine synthase/0.649
2pb5SAHDiphthine synthase/0.630
2eniSAHDiphthine synthase/0.625
2emrSAHDiphthine synthase/0.622
2p6dSAHDiphthine synthase/0.621
2e7rSAHDiphthine synthase/0.615
2ehlSAHDiphthine synthase/0.613
2dxvSAHDiphthine synthase/0.610
2p5cSAHDiphthine synthase/0.608
2eh5SAHDiphthine synthase/0.606
2dsiSAHDiphthine synthase/0.600
2ejkSAHDiphthine synthase/0.592
2ek7SAHDiphthine synthase/0.586
2p2xSAHDiphthine synthase/0.576
2eeqSAHDiphthine synthase/0.575
2emuSAHDiphthine synthase/0.573
2owkSAHDiphthine synthase/0.572
2pcmSAHDiphthine synthase/0.572
2e8qSAHDiphthine synthase/0.570
2dv7SAHDiphthine synthase/0.553
2pb4SAHDiphthine synthase/0.553
2dsgSAHDiphthine synthase/0.552
2ed5SAHDiphthine synthase/0.544
2el0SAHDiphthine synthase/0.543
2eleSAHDiphthine synthase/0.540
2en5SAHDiphthine synthase/0.540
2pcgSAHDiphthine synthase/0.537
2eglSAHDiphthine synthase/0.531
2egsSAHDiphthine synthase/0.528
2dv4SAHDiphthine synthase/0.525
2ekaSAHDiphthine synthase/0.524
2pb6SAHDiphthine synthase/0.520
2eh2SAHDiphthine synthase/0.516
2p5fSAHDiphthine synthase/0.516
2e16SAHDiphthine synthase/0.508
2huxSAHDiphthine synthase/0.508
1wngSAHDiphthine synthase/0.503
2el3SAHDiphthine synthase/0.499
2e8rSAHDiphthine synthase/0.496
2e08SAHDiphthine synthase/0.494
2ek2SAHDiphthine synthase/0.493
2owvSAHDiphthine synthase/0.493
2dshSAHDiphthine synthase/0.491
2egbSAHDiphthine synthase/0.491
2dv3SAHDiphthine synthase/0.490
2e4nSAHDiphthine synthase/0.481
2dxxSAHDiphthine synthase/0.480
2owgSAHDiphthine synthase/0.473
2pckSAHDiphthine synthase/0.472
2pchSAHDiphthine synthase/0.468
2p6iSAHDiphthine synthase/0.466
2eh4SAHDiphthine synthase/0.462
2ejjSAHDiphthine synthase/0.462
1vceSAHDiphthine synthase/0.460
2huvSAHDiphthine synthase/0.457
2pcaSAHDiphthine synthase/0.457
2e8hSAHDiphthine synthase/0.456
2eldSAHDiphthine synthase/0.456
2ek4SAHDiphthine synthase/0.455
2dekSAHDiphthine synthase/0.453
2p9dSAHDiphthine synthase/0.453
2pciSAHDiphthine synthase/0.453
2hr8SAHDiphthine synthase/0.450
2z6rSAHDiphthine synthase/0.450
2e17SAHDiphthine synthase/0.449
2owuSAHDiphthine synthase/0.446
2hutSAHDiphthine synthase/0.445