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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2e08SAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2e08SAHDiphthine synthase/1.000
2egbSAHDiphthine synthase/0.803
2p6iSAHDiphthine synthase/0.775
2owuSAHDiphthine synthase/0.702
2owvSAHDiphthine synthase/0.691
2egsSAHDiphthine synthase/0.688
2pckSAHDiphthine synthase/0.686
2eleSAHDiphthine synthase/0.684
2p6dSAHDiphthine synthase/0.683
2eniSAHDiphthine synthase/0.678
2e8hSAHDiphthine synthase/0.676
2p2xSAHDiphthine synthase/0.676
2pcgSAHDiphthine synthase/0.675
2eeqSAHDiphthine synthase/0.674
2dxxSAHDiphthine synthase/0.672
2e7rSAHDiphthine synthase/0.670
2dekSAHDiphthine synthase/0.662
2pb5SAHDiphthine synthase/0.659
2ejkSAHDiphthine synthase/0.658
2dshSAHDiphthine synthase/0.656
2p5cSAHDiphthine synthase/0.654
2ehlSAHDiphthine synthase/0.651
2eglSAHDiphthine synthase/0.648
2dxwSAHDiphthine synthase/0.642
2p5fSAHDiphthine synthase/0.642
2ejjSAHDiphthine synthase/0.640
2dxvSAHDiphthine synthase/0.637
2el3SAHDiphthine synthase/0.632
1vceSAHDiphthine synthase/0.630
2p6kSAHDiphthine synthase/0.629
2ekaSAHDiphthine synthase/0.626
2huqSAHDiphthine synthase/0.625
2owkSAHDiphthine synthase/0.625
2e8rSAHDiphthine synthase/0.617
2dv7SAHDiphthine synthase/0.615
2dv4SAHDiphthine synthase/0.614
2dsiSAHDiphthine synthase/0.611
2p9dSAHDiphthine synthase/0.608
2pciSAHDiphthine synthase/0.608
2e07SAHDiphthine synthase/0.604
2dv3SAHDiphthine synthase/0.603
2e16SAHDiphthine synthase/0.603
2e15SAHDiphthine synthase/0.602
2e4nSAHDiphthine synthase/0.599
2ek3SAHDiphthine synthase/0.599
2hr8SAHDiphthine synthase/0.599
2owgSAHDiphthine synthase/0.599
2dsgSAHDiphthine synthase/0.597
2e8sSAHDiphthine synthase/0.596
2emrSAHDiphthine synthase/0.596
2ed5SAHDiphthine synthase/0.595
2eldSAHDiphthine synthase/0.594
2ek7SAHDiphthine synthase/0.591
2owfSAHDiphthine synthase/0.587
2eh4SAHDiphthine synthase/0.586
2eh5SAHDiphthine synthase/0.584
2p6lSAHDiphthine synthase/0.583
2dv5SAHDiphthine synthase/0.581
2e17SAHDiphthine synthase/0.577
2huvSAHDiphthine synthase/0.572
2z6rSAHDiphthine synthase/0.572
2ed3SAHDiphthine synthase/0.569
2pcmSAHDiphthine synthase/0.568
2emuSAHDiphthine synthase/0.567
2en5SAHDiphthine synthase/0.566
1wngSAHDiphthine synthase/0.565
2pchSAHDiphthine synthase/0.563
2el0SAHDiphthine synthase/0.558
2pcaSAHDiphthine synthase/0.555
2eh2SAHDiphthine synthase/0.550
2hutSAHDiphthine synthase/0.546
2ek4SAHDiphthine synthase/0.541
2ek2SAHDiphthine synthase/0.537
2pb4SAHDiphthine synthase/0.533
2huxSAHDiphthine synthase/0.529
2pb6SAHDiphthine synthase/0.518
2e8qSAHDiphthine synthase/0.517
2ejzSAHDiphthine synthase/0.514
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.460
1xe55FEPlasmepsin-23.4.23.390.443
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.440