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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2e07SAHDiphthine synthase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2e07SAHDiphthine synthase/1.000
2ejjSAHDiphthine synthase/0.785
2eh4SAHDiphthine synthase/0.771
2e4nSAHDiphthine synthase/0.768
2huqSAHDiphthine synthase/0.767
2z6rSAHDiphthine synthase/0.757
2owuSAHDiphthine synthase/0.747
2huvSAHDiphthine synthase/0.742
2dshSAHDiphthine synthase/0.736
1wngSAHDiphthine synthase/0.726
2ed3SAHDiphthine synthase/0.714
2eeqSAHDiphthine synthase/0.706
2p6iSAHDiphthine synthase/0.705
2e17SAHDiphthine synthase/0.701
2p9dSAHDiphthine synthase/0.692
2owgSAHDiphthine synthase/0.691
2el3SAHDiphthine synthase/0.688
2pb5SAHDiphthine synthase/0.667
2dxxSAHDiphthine synthase/0.665
2ed5SAHDiphthine synthase/0.655
2pcaSAHDiphthine synthase/0.655
2e8rSAHDiphthine synthase/0.653
2el0SAHDiphthine synthase/0.652
2e15SAHDiphthine synthase/0.650
2ek2SAHDiphthine synthase/0.650
2p5cSAHDiphthine synthase/0.640
2dv4SAHDiphthine synthase/0.638
1vceSAHDiphthine synthase/0.634
2eniSAHDiphthine synthase/0.633
2pckSAHDiphthine synthase/0.633
2dv3SAHDiphthine synthase/0.630
2p2xSAHDiphthine synthase/0.628
2e08SAHDiphthine synthase/0.624
2eldSAHDiphthine synthase/0.619
2pb6SAHDiphthine synthase/0.618
2dsiSAHDiphthine synthase/0.617
2egbSAHDiphthine synthase/0.616
2ek4SAHDiphthine synthase/0.616
2dekSAHDiphthine synthase/0.609
2dv5SAHDiphthine synthase/0.607
2pciSAHDiphthine synthase/0.605
2owkSAHDiphthine synthase/0.603
2e7rSAHDiphthine synthase/0.593
2p6lSAHDiphthine synthase/0.593
2owvSAHDiphthine synthase/0.592
2dv7SAHDiphthine synthase/0.590
2e8hSAHDiphthine synthase/0.589
2ek3SAHDiphthine synthase/0.589
2p5fSAHDiphthine synthase/0.583
2hr8SAHDiphthine synthase/0.581
2dxwSAHDiphthine synthase/0.579
2dsgSAHDiphthine synthase/0.576
2p6kSAHDiphthine synthase/0.575
2owfSAHDiphthine synthase/0.574
2hutSAHDiphthine synthase/0.572
2eglSAHDiphthine synthase/0.566
2ehlSAHDiphthine synthase/0.564
2pchSAHDiphthine synthase/0.561
2emrSAHDiphthine synthase/0.560
2huxSAHDiphthine synthase/0.560
2e8qSAHDiphthine synthase/0.559
2egsSAHDiphthine synthase/0.559
2e16SAHDiphthine synthase/0.558
2ejkSAHDiphthine synthase/0.554
2pcgSAHDiphthine synthase/0.554
2eh2SAHDiphthine synthase/0.549
2emuSAHDiphthine synthase/0.539
2dxvSAHDiphthine synthase/0.538
2e8sSAHDiphthine synthase/0.536
2en5SAHDiphthine synthase/0.532
2eleSAHDiphthine synthase/0.526
2ek7SAHDiphthine synthase/0.523
2ekaSAHDiphthine synthase/0.523
2eh5SAHDiphthine synthase/0.512
2ejzSAHDiphthine synthase/0.505
2pb4SAHDiphthine synthase/0.503
2pcmSAHDiphthine synthase/0.497
2p6dSAHDiphthine synthase/0.492
3up5FAD2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.474
1f8fNADBenzyl alcohol dehydrogenase/0.455
3lqfNADGalactitol dehydrogenase/0.452
1bwsNDPGDP-L-fucose synthase/0.447
1xe55FEPlasmepsin-23.4.23.390.440