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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2bpoNAPNADPH--cytochrome P450 reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2bpoNAPNADPH--cytochrome P450 reductase/1.000
2bf4NAPNADPH--cytochrome P450 reductase/0.719
2bn4NAPNADPH--cytochrome P450 reductase/0.565
4yau2AMNADPH--cytochrome P450 reductase/0.532
3qfcNAPNADPH--cytochrome P450 reductase/0.499
3qfsNAPNADPH--cytochrome P450 reductase/0.494
1tllNAPNitric oxide synthase, brain1.14.13.390.493
3qfrNAPNADPH--cytochrome P450 reductase/0.492
4yaw2AMNADPH--cytochrome P450 reductase/0.492
4yaf2AMNADPH--cytochrome P450 reductase/0.488
1ja1NAPNADPH--cytochrome P450 reductase/0.483
4y9rNAPNADPH--cytochrome P450 reductase/0.483
3qftNAPNADPH--cytochrome P450 reductase/0.480
4yal2AMNADPH--cytochrome P450 reductase/0.476
4y9uNAPNADPH--cytochrome P450 reductase/0.475
1f20NAPNitric oxide synthase, brain1.14.13.390.473
4y7cNAPNADPH--cytochrome P450 reductase/0.471
2rc6NAPFerredoxin--NADP reductase/0.467
3zc3NAPFerredoxin--NADP reductase1.18.1.20.464
3qe2NAPNADPH--cytochrome P450 reductase/0.461
1amoNAPNADPH--cytochrome P450 reductase/0.460
1gjrNAPFerredoxin--NADP reductase1.18.1.20.452
1kr2TADNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.448
1gzuNMNNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.447