Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1uxp | NAP | NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
1uxp | NAP | NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase | / | 1.000 | |
1uxv | NAP | NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase | / | 0.744 | |
1uxr | NAP | NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase | / | 0.534 | |
1ky8 | NAP | NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase | / | 0.531 |