Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1upw | 444 | Oxysterols receptor LXR-beta |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 1upw | 444 | Oxysterols receptor LXR-beta | / | 1.000 | |
| 1pq9 | 44B | Oxysterols receptor LXR-beta | / | 0.541 | |
| 1pqc | 444 | Oxysterols receptor LXR-beta | / | 0.537 | |
| 1p8d | CO1 | Oxysterols receptor LXR-beta | / | 0.471 | |
| 2acl | L05 | Oxysterols receptor LXR-alpha | / | 0.461 | |
| 3ipq | 965 | Oxysterols receptor LXR-alpha | / | 0.442 | |
| 1pq6 | 965 | Oxysterols receptor LXR-beta | / | 0.441 | |
| 4dk7 | 0KS | Oxysterols receptor LXR-beta | / | 0.440 |