Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1qzy | TDE | Methionine aminopeptidase 2 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
1qzy | TDE | Methionine aminopeptidase 2 | / | 1.000 | |
1r5g | AO1 | Methionine aminopeptidase 2 | / | 0.630 | |
1r5h | AO2 | Methionine aminopeptidase 2 | / | 0.615 | |
2oaz | I96 | Methionine aminopeptidase 2 | / | 0.589 | |
1r58 | AO5 | Methionine aminopeptidase 2 | / | 0.531 | |
2ea2 | F77 | Methionine aminopeptidase 2 | / | 0.497 | |
1yw7 | A41 | Methionine aminopeptidase 2 | / | 0.474 | |
3iu7 | FCD | Methionine aminopeptidase 2 | / | 0.473 | |
2ga2 | A19 | Methionine aminopeptidase 2 | / | 0.458 | |
1yw9 | A84 | Methionine aminopeptidase 2 | / | 0.455 | |
1yw8 | A75 | Methionine aminopeptidase 2 | / | 0.454 | |
3ufl | 508 | Beta-secretase 1 | 3.4.23.46 | 0.453 | |
3pke | Y10 | Methionine aminopeptidase 2 | / | 0.442 |