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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1qinGIPLactoylglutathione lyase4.4.1.5

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1qinGIPLactoylglutathione lyase4.4.1.51.000
1qipGNBLactoylglutathione lyase4.4.1.50.616
3w0uHPWLactoylglutathione lyase4.4.1.50.569
1froGSBLactoylglutathione lyase4.4.1.50.505
3w0tHPULactoylglutathione lyase4.4.1.50.493
1bh5GTXLactoylglutathione lyase4.4.1.50.491
2za0MGILactoylglutathione lyase4.4.1.50.481
4pv5CBWLactoylglutathione lyase4.4.1.50.461
1blzACVIsopenicillin N synthase1.21.3.10.445
3vw9HPJLactoylglutathione lyase4.4.1.50.445
2qo5CHDFatty acid-binding protein 10-A, liver basic/0.440