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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.565
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.561
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.555
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.544
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.540
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.540
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.537
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.535
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.533
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.524
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.511
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.510
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.503
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.497
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.495
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.489
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.487
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.487
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.479
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
3dneLL1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
1stcSTUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.443
4gv10XZRAC-alpha serine/threonine-protein kinase2.7.11.10.442