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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.640
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.629
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.609
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.603
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.597
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.592
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.585
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.578
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.565
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.564
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.561
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.558
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.556
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.554
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.547
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.540
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.540
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.533
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.529
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.526
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.518
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.477
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.457
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.450
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.449
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440