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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1pl1ABYGlutathione S-transferase A12.5.1.18

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1pl1ABYGlutathione S-transferase A12.5.1.181.000
3l0hGTXGlutathione S-transferase A12.5.1.180.598
1k3yGTXGlutathione S-transferase A12.5.1.180.521
1pl2ABYGlutathione S-transferase A12.5.1.180.516
1guhGSBGlutathione S-transferase A12.5.1.180.503
3ktlGTXGlutathione S-transferase A12.5.1.180.489
1k3lGTXGlutathione S-transferase A12.5.1.180.470
1gsfEAAGlutathione S-transferase A12.5.1.180.449
3ik9BOBGlutathione S-transferase A12.5.1.180.448