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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1ogiFADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1ogiFADFerredoxin--NADP reductase1.18.1.21.000
1h42FADFerredoxin--NADP reductase1.18.1.20.796
1ogjFADFerredoxin--NADP reductase1.18.1.20.713
1e62FADFerredoxin--NADP reductase1.18.1.20.636
1queFADFerredoxin--NADP reductase1.18.1.20.588
1gr1FADFerredoxin--NADP reductase1.18.1.20.572
3vo2FADFerredoxin--NADP reductase/0.572
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.568
1e63FADFerredoxin--NADP reductase1.18.1.20.535
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.535
4c43FADFerredoxin--NADP reductase1.18.1.20.535
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.528
1bjkFADFerredoxin--NADP reductase1.18.1.20.527
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.524
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.523
1e64FADFerredoxin--NADP reductase1.18.1.20.522
2b5oFADFerredoxin--NADP reductase1.18.1.20.516
3zbtFADFerredoxin--NADP reductase1.18.1.20.514
1gawFADFerredoxin/0.513
1qh0FADFerredoxin--NADP reductase1.18.1.20.507
3zc3FADFerredoxin--NADP reductase1.18.1.20.507
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.501
1qgyFADFerredoxin--NADP reductase1.18.1.20.501
1qgzFADFerredoxin--NADP reductase1.18.1.20.497
1gjrFADFerredoxin--NADP reductase1.18.1.20.493
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.490
1h85FADFerredoxin--NADP reductase1.18.1.20.488
1sm4FADFerredoxin--NADP reductase/0.482
2ewmNAD(S)-1-Phenylethanol dehydrogenase1.1.1.3110.480
1gaqFADFerredoxin/0.478
5ah5LSSLeucine--tRNA ligase/0.474
4bprFADFerredoxin--NADP reductase1.18.1.20.473
3w5uFADFerredoxin/0.467
3i0pNADMalate dehydrogenase, putative/0.464
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.464
3qfcFADNADPH--cytochrome P450 reductase/0.460
5a4vQUEGlutathione S-transferase F22.5.1.180.460
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.453
1ni4TPPPyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial1.2.4.10.453
1ni4TPPPyruvate dehydrogenase E1 component subunit beta, mitochondrial1.2.4.10.453
4rvfTYDD-mycarose 3-C-methyltransferase/0.453
1amoFADNADPH--cytochrome P450 reductase/0.452
2ptfFMNUncharacterized protein MTH_863/0.451
2bpoFADNADPH--cytochrome P450 reductase/0.450
2rc6FADFerredoxin--NADP reductase/0.450
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.449
2xnvVU3Soluble acetylcholine receptor/0.449
3uzwNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.449
3bw4FMNPutative 2-nitropropane dioxygenase/0.447
4y9uFADNADPH--cytochrome P450 reductase/0.447
5dp2NAPCurF/0.447
1tllFADNitric oxide synthase, brain1.14.13.390.442
3jqrFADFerredoxin--NADP reductase, apicoplast/0.442
4a312CBGlycylpeptide N-tetradecanoyltransferase/0.442
3o4rNAPDehydrogenase/reductase SDR family member 41.1.1.1840.441