sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1k4q	FAD	Glutathione reductase, mitochondrial	1.8.1.7

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
1k4q	FAD	Glutathione reductase, mitochondrial	1.8.1.7	1.000
1gsn	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.656
1grh	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.652
3grs	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.615
4gr1	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.606
1gre	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.569
1grg	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.563
3sqp	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.546
1bwc	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.541
3dk9	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.501
1gra	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.493
3dk8	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.483
3dgz	FAD	Thioredoxin reductase 2, mitochondrial	1.8.1.9	0.476
2v6o	FAD	Thioredoxin glutathione reductase	/	0.472
3dk4	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.472
2nvk	FAD	Thioredoxin reductase 1, mitochondrial	1.8.1.9	0.449