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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1icpFMN12-oxophytodienoate reductase 11.3.1.42

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1icpFMN12-oxophytodienoate reductase 11.3.1.421.000
1icsFMN12-oxophytodienoate reductase 11.3.1.420.531
4tmbFMNOld yellow enzyme/0.505
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.502
1h50FMNPentaerythritol tetranitrate reductase/0.488
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.488
1q45FMN12-oxophytodienoate reductase 31.3.1.420.486
2q3rFMN12-oxophytodienoate reductase 11.3.1.420.473
4rnvFMNNADPH dehydrogenase 11.6.99.10.473
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.472
1icqFMN12-oxophytodienoate reductase 11.3.1.420.468
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.468
2abbFMNPentaerythritol tetranitrate reductase/0.457
3f03FMNPentaerythritol tetranitrate reductase/0.454
3p62FMNPentaerythritol tetranitrate reductase/0.449
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.447
3p74FMNPentaerythritol tetranitrate reductase/0.443
2hs6FMN12-oxophytodienoate reductase 31.3.1.420.442
4rnuFMNNADPH dehydrogenase 11.6.99.10.440