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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1ht0NADAlcohol dehydrogenase 1C1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1ht0NADAlcohol dehydrogenase 1C1.1.1.11.000
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.582
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.574
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.569
1hldNADAlcohol dehydrogenase E chain1.1.1.10.550
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.533
1hetNADAlcohol dehydrogenase E chain1.1.1.10.513
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.510
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.506
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.503
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.502
1hszNADAlcohol dehydrogenase 1B1.1.1.10.500
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.499
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.498
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.498
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.496
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.490
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.488
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.485
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.480
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.469
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.457
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.455
1adcPADAlcohol dehydrogenase E chain1.1.1.10.454
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.454
1heuNADAlcohol dehydrogenase E chain1.1.1.10.453
1axgNADAlcohol dehydrogenase E chain1.1.1.10.447