sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1hbv | GAN | Gag-Pol polyprotein |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 1hbv | GAN | Gag-Pol polyprotein | / | 1.000 | |
| 1izi | Q50 | Gag-Pol polyprotein | 3.4.23.16 | 0.703 | |
| 2aqu | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.700 | |
| 1hwr | 216 | Gag-Pol polyprotein | 3.4.23.16 | 0.687 | |
| 1m0b | 0ZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.667 | |
| 2p3b | 3TL | V-1 PROTEASE protein | / | 0.660 | |
| 2p3b | 3TL | V-1 protease | / | 0.660 | |
| 3tog | 079 | Gag-Pol polyprotein | 2.7.7.49 | 0.656 | |
| 1mui | AB1 | Protease | / | 0.655 | |
| 2z54 | AB1 | Gag-Pol polyprotein | 3.4.23.16 | 0.654 | |
| 1qbr | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.653 | |
| 3toh | 079 | Gag-Pol polyprotein | 2.7.7.49 | 0.652 | |
| 1qbt | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.651 | |
| 2f81 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.651 | |
| 4i8z | G08 | Gag-Pol polyprotein | 3.4.23.16 | 0.644 | |
| 1a8g | 2Z4 | Gag-Pol polyprotein | 3.4.23.16 | 0.643 | |
| 1vik | BAY | Gag-Pol polyprotein | / | 0.643 | |
| 3lzs | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.643 | |
| 1xl5 | 190 | Gag-Pol polyprotein | 3.4.23.16 | 0.641 | |
| 3em3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.640 | |
| 3pwm | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.640 | |
| 1bv7 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.639 | |
| 1sbg | IM1 | Gag-Pol polyprotein | / | 0.635 | |
| 4kb9 | G79 | Protease | / | 0.635 | |
| 1mes | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.634 | |
| 1bv9 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.632 | |
| 2ien | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.632 | |
| 4dfg | 0JV | Gag-Pol polyprotein | 3.4.23.16 | 0.632 | |
| 1qbu | 846 | Gag-Pol polyprotein | 3.4.23.16 | 0.626 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 0.626 | |
| 1qbs | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.623 | |
| 3tl9 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.618 | |
| 1d4k | PI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.616 | |
| 9hvp | 0E9 | Gag-Pol polyprotein | / | 0.615 | |
| 1d4y | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.611 | |
| 1zsr | 0ZT | Gag-Pol polyprotein | 3.4.23.16 | 0.611 | |
| 1k1u | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.610 | |
| 2qnn | QN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.610 | |
| 1bdl | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.608 | |
| 2f3k | RO1 | Protease | / | 0.608 | |
| 2p3a | 3TL | Pol protein | / | 0.608 | |
| 1ec3 | MS3 | Gag-Pol polyprotein | 3.4.23.16 | 0.607 | |
| 1izh | Q50 | Protease | / | 0.607 | |
| 1sdv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.607 | |
| 3ndx | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.607 | |
| 3nxe | 2NC | Protease | / | 0.607 | |
| 1bdq | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 1meu | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 3qrm | NK7 | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 1b6m | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 1dif | A85 | Gag-Pol polyprotein | / | 0.605 | |
| 1hvs | A77 | Gag-Pol polyprotein | / | 0.605 | |
| 2p3d | 3TL | Protease | / | 0.605 | |
| 2pyn | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 3pwr | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 4a4q | UX9 | Pol protein | / | 0.605 | |
| 1hsg | MK1 | Gag-Pol polyprotein | / | 0.604 | |
| 1hvi | A77 | Protease | / | 0.604 | |
| 1z1r | HBH | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 2r5q | 1UN | Gag-Pol polyprotein | / | 0.604 | |
| 1k2b | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.603 | |
| 2q54 | MU1 | Protease | / | 0.603 | |
| 2r5p | MK1 | Gag-Pol polyprotein | / | 0.603 | |
| 1sdt | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 2bpy | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 3i2l | 2NC | Protease | / | 0.601 | |
| 3ttp | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 1mer | DMQ | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 1mtr | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 2bpw | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 2hs2 | 017 | Protease | / | 0.600 | |
| 3ekx | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 3el5 | 1UN | Gag-Pol polyprotein | / | 0.600 | |
| 1hxb | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 1idb | 0DO | Gag-Pol polyprotein | / | 0.599 | |
| 2a4f | AAU | V-1 protease | / | 0.599 | |
| 2bpz | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 3cyx | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 3kfs | 3TL | Gag-Pol polyprotein | / | 0.599 | |
| 1hvj | A78 | Gag-Pol polyprotein | / | 0.598 | |
| 1hvl | A76 | Gag-Pol polyprotein | / | 0.598 | |
| 2pym | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 3bxs | DRS | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 3el4 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 3kfr | 3TL | Gag-Pol polyprotein | / | 0.598 | |
| 1daz | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 1ivp | 1ZK | Gag-Pol polyprotein | / | 0.597 | |
| 2bpx | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 2q64 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 3d1x | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 3kfn | 3TL | Gag-Pol polyprotein | / | 0.597 | |
| 1bdr | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 1fg8 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 2aoe | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 2nmy | ROC | Protease | / | 0.596 | |
| 3ndw | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 3sa9 | A68 | Protease | / | 0.596 | |
| 1hih | C20 | Gag-Pol polyprotein | / | 0.595 | |
| 1ohr | 1UN | V-1 PROTEASE protein | / | 0.595 | |
| 1z1h | HBB | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 1zsf | 0ZS | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 2avs | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 2pqz | G0G | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 3nu9 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 3qbf | JHG | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 1hsh | MK1 | Gag-Pol polyprotein | / | 0.594 | |
| 2bpv | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.594 | |
| 2qhc | AB1 | Protease | / | 0.594 | |
| 2qhz | MZ2 | Gag-Pol polyprotein | / | 0.594 | |
| 3nyg | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.594 | |
| 1ebz | BEC | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 1tcx | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 2aid | THK | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 2uy0 | HV1 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 3s56 | ROC | Protease | / | 0.593 | |
| 1rl8 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 3kdd | JZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 3sa7 | 55A | Protease | / | 0.592 | |
| 3vfb | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 4dqc | 017 | Gag-Pol polyprotein | / | 0.592 | |
| 4hdp | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 1ec2 | BEJ | Gag-Pol polyprotein | 3.4.23.16 | 0.591 | |
| 2cej | 1AH | Pol protein | / | 0.591 | |
| 3oxw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.591 | |
| 1ida | 0PO | Gag-Pol polyprotein | 3.4.23.47 | 0.590 | |
| 1ody | LP1 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 2fxe | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3kf0 | 3TL | Gag-Pol polyprotein | / | 0.590 | |
| 3ndu | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3sa3 | 23X | Protease | / | 0.590 | |
| 1bwa | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1hii | C20 | Gag-Pol polyprotein | / | 0.589 | |
| 2q5k | AB1 | Protease | / | 0.589 | |
| 3oxc | ROC | Protease | / | 0.589 | |
| 3qn8 | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1ec0 | BED | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1pro | A88 | Gag-Pol polyprotein | / | 0.588 | |
| 1vij | BAY | Gag-Pol polyprotein | / | 0.588 | |
| 3em4 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1hvh | Q82 | Gag-Pol polyprotein | 3.4.23.16 | 0.587 | |
| 2p3c | 3TL | Protease | / | 0.587 | |
| 2xye | CXG | Gag-Pol polyprotein | / | 0.587 | |
| 4qgi | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.587 | |
| 1iiq | 0ZR | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 1sdu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 2qak | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 2wkz | 5AH | Gag-Pol polyprotein | / | 0.586 | |
| 3ggx | GGX | Gag-Pol polyprotein | / | 0.586 | |
| 3s54 | 017 | Protease | / | 0.586 | |
| 1b6k | PI5 | Gag-Pol polyprotein | 3.4.23.16 | 0.585 | |
| 1c6x | 3IN | Protease | / | 0.585 | |
| 2b7z | MK1 | Gag-Pol polyprotein | / | 0.585 | |
| 2bb9 | AKC | Gag-Pol polyprotein | 3.4.23.16 | 0.585 | |
| 3aid | ARQ | Gag-Pol polyprotein | 3.4.23.16 | 0.585 | |
| 3gga | GGW | Gag-Pol polyprotein | / | 0.585 | |
| 3sac | AF8 | Protease | / | 0.585 | |
| 1c6z | ROC | Protease | / | 0.584 | |
| 1d4l | PI9 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1d4s | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1g35 | AHF | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 2qi3 | MZ5 | Gag-Pol polyprotein | / | 0.584 | |
| 2qi5 | MZ7 | Gag-Pol polyprotein | / | 0.584 | |
| 2r3t | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 2rkf | AB1 | Pol protein | / | 0.584 | |
| 3oxv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 3saa | 77F | Protease | / | 0.584 | |
| 4djq | M86 | Pol polyprotein | / | 0.584 | |
| 4hdf | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1k2c | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 2avv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 2nnp | ROC | Protease | / | 0.583 | |
| 2qi7 | MZ9 | Gag-Pol polyprotein | / | 0.583 | |
| 3a2o | KNJ | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 3d1y | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 3sa4 | F72 | Protease | / | 0.583 | |
| 2fdd | 385 | Pol protein | / | 0.582 | |
| 3d1z | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3ekq | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3mws | 017 | Pol protein | / | 0.582 | |
| 1hxw | RIT | Gag-Pol polyprotein | / | 0.581 | |
| 1w5v | BE3 | Gag-Pol polyprotein | 3.4.23.16 | 0.581 | |
| 1d4i | BEG | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 1fgc | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 1hvk | A79 | Gag-Pol polyprotein | / | 0.580 | |
| 1wbm | BLL | Pol protein | / | 0.580 | |
| 2i4x | KGQ | Protease | / | 0.580 | |
| 3sab | F78 | Protease | / | 0.580 | |
| 3st5 | G89 | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 1jld | 0PP | Gag-Pol polyprotein | / | 0.579 | |
| 2bqv | A1A | Protease | / | 0.579 | |
| 2qd8 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 2qhy | MZ1 | Gag-Pol polyprotein | / | 0.579 | |
| 2qnp | QN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 2r3w | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3el1 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3kdc | JZP | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3lzv | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3oxx | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3tof | 076 | Gag-Pol polyprotein | 2.7.7.49 | 0.579 | |
| 4dqh | 017 | Gag-Pol polyprotein | / | 0.579 | |
| 1ajx | AH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.578 | |
| 1wbk | 568 | Pol protein | / | 0.578 | |
| 1a94 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 1ebw | BEI | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 1hvr | XK2 | Gag-Pol polyprotein | / | 0.577 | |
| 1odw | 0E8 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 2cen | 4AH | Protease | / | 0.577 | |
| 2f80 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 2nnk | ROC | Protease | / | 0.577 | |
| 2qnq | QN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 3o9d | K19 | Pol polyprotein | / | 0.577 | |
| 3ok9 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 3qrs | NK8 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 4gb2 | 0LQ | Gag-Pol polyprotein | 2.7.7.49 | 0.577 | |
| 1hpv | 478 | Gag-Pol polyprotein | / | 0.576 | |
| 2q63 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 2qi0 | MZ3 | Gag-Pol polyprotein | / | 0.576 | |
| 2r43 | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3ekv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3k4v | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3mxe | K54 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3vfa | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 4ye3 | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 1dw6 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 2f8g | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 2wl0 | 5AH | Gag-Pol polyprotein | / | 0.575 | |
| 3jvy | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 3nu6 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 3qp0 | NI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 4rvj | 478 | Protease | / | 0.575 | |
| 2pwc | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.574 | |
| 2qd7 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.574 | |
| 2z4o | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.574 | |
| 3bgb | LJG | Gag-Pol polyprotein | 3.4.23.16 | 0.574 | |
| 3gi6 | D78 | Gag-Pol polyprotein | / | 0.574 | |
| 2psv | MUV | Protease | / | 0.573 | |
| 3eky | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 3ndt | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 4njv | RIT | Protease | / | 0.573 | |
| 1a9m | U0E | Gag-Pol polyprotein | / | 0.572 | |
| 1hpx | KNI | Gag-Pol polyprotein | / | 0.572 | |
| 2pk6 | O33 | V-1 protease | / | 0.572 | |
| 2xyf | G40 | Gag-Pol polyprotein | / | 0.572 | |
| 3el9 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3i6o | GR6 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3qro | NK9 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3vf5 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3zpt | M8Y | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 1fej | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 1fg6 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 1hiv | 1ZK | Gag-Pol polyprotein | / | 0.571 | |
| 2hb3 | GRL | Protease | / | 0.571 | |
| 3sa5 | A69 | Protease | / | 0.571 | |
| 1b6p | PI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 1c70 | L75 | Protease | / | 0.570 | |
| 1eby | BEB | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 1ff0 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 1hos | PHP | Gag-Pol polyprotein | / | 0.570 | |
| 3gi4 | K60 | Gag-Pol polyprotein | / | 0.570 | |
| 3s43 | 478 | Protease | / | 0.570 | |
| 1d4h | BEH | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 1dmp | DMQ | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 1kzk | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 1siv | PSI | Gag-Pol polyprotein | / | 0.569 | |
| 2pk5 | 075 | Protease | / | 0.569 | |
| 2qi4 | MZ6 | Gag-Pol polyprotein | / | 0.569 | |
| 2qi6 | MZ8 | Gag-Pol polyprotein | / | 0.569 | |
| 3d20 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 3o9g | F53 | Gag-Pol polyprotein | / | 0.569 | |
| 1ec1 | BEE | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1ffi | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1npa | 3NH | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1npw | LGZ | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1sgu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3nwq | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3o9c | K20 | Pol polyprotein | / | 0.568 | |
| 4j5j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1w5x | BE5 | Gag-Pol polyprotein | 3.4.23.16 | 0.567 | |
| 2i4w | KGQ | Protease | / | 0.567 | |
| 2ieo | 017 | Protease | / | 0.567 | |
| 2psu | MUU | Protease | / | 0.567 | |
| 3i7e | DJR | Gag-Pol polyprotein | / | 0.567 | |
| 3nuo | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.567 | |
| 3o9i | A61 | Gag-Pol polyprotein | / | 0.567 | |
| 3s85 | LK0 | Gag-Pol polyprotein | / | 0.567 | |
| 3sa8 | K83 | Protease | / | 0.567 | |
| 4dqb | 017 | Gag-Pol polyprotein | / | 0.567 | |
| 4q1y | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.567 | |
| 1fff | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 1ivq | 0PX | Gag-Pol polyprotein | / | 0.566 | |
| 1t7k | BH0 | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 3ekw | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 2qci | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 2qd6 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 3ec0 | GRL | Gag-Pol polyprotein | 3.4.23.47 | 0.565 | |
| 3hzc | 2NC | Protease | / | 0.565 | |
| 3qaa | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 4dqe | 017 | Gag-Pol polyprotein | / | 0.565 | |
| 4njt | 017 | Protease | / | 0.565 | |
| 1w5y | BE6 | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 2avm | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 3nu4 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 3o9f | K2D | Gag-Pol polyprotein | / | 0.564 | |
| 1ajv | NMB | Gag-Pol polyprotein | 3.4.23.16 | 0.563 | |
| 1d4j | MSC | Gag-Pol polyprotein | 3.4.23.16 | 0.563 | |
| 1t7i | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.563 | |
| 2i4v | DJR | V-1 protease | / | 0.563 | |
| 2q55 | MU0 | Protease | / | 0.563 | |
| 2uxz | HI1 | Gag-Pol polyprotein | 3.4.23.16 | 0.563 | |
| 3lin | E13 | Protease | / | 0.563 | |
| 4djr | 0KJ | Pol polyprotein | / | 0.563 | |
| 4hla | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.563 | |
| 1hpo | UNI | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 2hc0 | AB2 | Protease | / | 0.562 | |
| 3djk | G55 | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 3ekt | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 3fx5 | KNI | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 3mxd | K53 | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 3nu5 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 3zps | EQM | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 4heg | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.562 | |
| 1mrw | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 2hs1 | 017 | Protease | / | 0.561 | |
| 3bhe | BZN | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3o9a | K14 | Pol polyprotein | / | 0.561 | |
| 4j55 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3cyw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.560 | |
| 3jw2 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.560 | |
| 3liq | E14 | Protease | / | 0.560 | |
| 3o9b | K2A | Pol polyprotein | / | 0.560 | |
| 1b6l | PI4 | Gag-Pol polyprotein | 3.4.23.16 | 0.559 | |
| 2upj | U02 | Gag-Pol polyprotein | 3.4.23.16 | 0.559 | |
| 3bxr | DRR | Gag-Pol polyprotein | 3.4.23.16 | 0.559 | |
| 3o9h | K2E | Gag-Pol polyprotein | / | 0.559 | |
| 3qih | FG7 | Gag-Pol polyprotein | 3.4.23.16 | 0.559 | |
| 2b60 | RIT | Pol polyprotein | / | 0.558 | |
| 2i4d | QFI | Protease | / | 0.558 | |
| 3dcr | KVS | Protease | / | 0.558 | |
| 3o9e | A60 | Pol polyprotein | / | 0.558 | |
| 4k4p | 3TL | Gag-Pol polyprotein | / | 0.558 | |
| 4q1w | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.558 | |
| 1g2k | NM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 2fde | 385 | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 3dk1 | G05 | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 3nu3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 3nuj | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 3sa6 | F71 | Protease | / | 0.557 | |
| 4dqf | 017 | Gag-Pol polyprotein | / | 0.557 | |
| 1bai | 0Q4 | Gag-Pro polyprotein | / | 0.556 | |
| 1t3r | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 2cem | 2AH | Pol protein | / | 0.556 | |
| 2qi1 | MZ4 | Gag-Pol polyprotein | / | 0.556 | |
| 2r38 | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 3jvw | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 3nwx | KVS | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 3o99 | K13 | Pol polyprotein | / | 0.556 | |
| 3vf7 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 4a6b | QG8 | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 4djp | M73 | Pol polyprotein | / | 0.556 | |
| 2a1e | IPF | Gag-Pol polyprotein | 3.4.23.16 | 0.555 | |
| 3ucb | 017 | Gag-Pol polyprotein | / | 0.555 | |
| 1bwb | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.554 | |
| 1c6y | MK1 | Protease | / | 0.554 | |
| 3qih | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.554 | |
| 4nju | TPV | Protease | / | 0.554 | |
| 3ufn | ROC | Gag-Pol polyprotein | / | 0.553 | |
| 2bbb | HH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 3ckt | YDP | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 3ecg | 065 | Gag-Pol polyprotein | 3.4.23.47 | 0.552 | |
| 3t3c | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 7upj | INU | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 1a8k | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 2fxd | DR7 | Pol polyprotein | / | 0.551 | |
| 3ggu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 3oy4 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 3zpu | M8B | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 4djo | MK5 | Pol polyprotein | / | 0.551 | |
| 4hdb | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.550 | |
| 3el0 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.549 | |
| 2idw | 017 | Protease | / | 0.548 | |
| 3upj | U03 | Gag-Pol polyprotein | / | 0.548 | |
| 1yt9 | OIS | Gag-Pol polyprotein | / | 0.547 | |
| 2fle | AI | Protease | / | 0.547 | |
| 2q3k | MUW | Gag-Pol polyprotein | / | 0.547 | |
| 3dck | KVI | Protease | / | 0.547 | |
| 4njs | G08 | Protease | / | 0.547 | |
| 1sh9 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.546 | |
| 3nls | 016 | Gag-Pol polyprotein | 3.4.23.16 | 0.546 | |
| 6upj | NIU | Gag-Pol polyprotein | / | 0.546 | |
| 1t7j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.545 | |
| 3qpj | N4I | Gag-Pol polyprotein | 3.4.23.16 | 0.545 | |
| 1msm | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.544 | |
| 1npv | L27 | Gag-Pol polyprotein | 3.4.23.16 | 0.544 | |
| 1xl2 | 189 | Gag-Pol polyprotein | 3.4.23.16 | 0.544 | |
| 2i4u | DJR | Protease | / | 0.543 | |
| 3bva | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.543 | |
| 3bvb | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.543 | |
| 3t11 | 3T1 | Gag-Pol polyprotein | 3.4.23.16 | 0.543 | |
| 1met | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.542 | |
| 4q1x | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.542 | |
| 1k6t | XN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.541 | |
| 3bgc | LJH | Gag-Pol polyprotein | 3.4.23.16 | 0.540 | |
| 3lzu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.540 | |
| 1tcw | IM1 | Gag-Pol polyprotein | / | 0.537 | |
| 3ekp | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.537 | |
| 3lix | E17 | Protease | / | 0.537 | |
| 1ebk | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.535 | |
| 2i0d | MUT | Protease | / | 0.534 | |
| 1k6v | XN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.533 | |
| 2o4p | TPV | Protease | / | 0.533 | |
| 3uhl | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.532 | |
| 2pwr | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.531 | |
| 3liv | E16 | Protease | / | 0.530 | |
| 5upj | UIN | Gag-Pol polyprotein | / | 0.530 | |
| 3ogq | AB1 | Pol polyprotein | / | 0.528 | |
| 3lit | E15 | Protease | / | 0.527 | |
| 1n49 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 4j54 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 3gi5 | K62 | Gag-Pol polyprotein | / | 0.523 | |
| 1msn | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.518 | |
| 2i0a | MUI | Protease | / | 0.518 | |
| 3so9 | 017 | Pol protein | / | 0.518 | |
| 4a6c | QG9 | Gag-Pol polyprotein | 3.4.23.16 | 0.516 | |
| 1k6c | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.505 | |
| 1mrx | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.502 | |
| 3slz | 3TL | Putative gag-pro-pol polyprotein | / | 0.500 | |
| 4upj | U04 | Gag-Pol polyprotein | / | 0.500 | |
| 3sm2 | 478 | Putative gag-pro-pol polyprotein | / | 0.498 | |
| 3wsj | MK1 | Protease | / | 0.489 | |
| 1qrp | HH0 | Pepsin A-4 | 3.4.23.1 | 0.462 | |
| 3vyd | VYD | Renin | 3.4.23.15 | 0.461 | |
| 1zth | ADP | RIO-type serine/threonine-protein kinase Rio1 | 2.7.11.1 | 0.459 | |
| 1bim | 0QB | Renin | 3.4.23.15 | 0.456 | |
| 4ek1 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.451 | |
| 1dz6 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.450 | |
| 3ieu | GDP | GTPase Era | / | 0.450 | |
| 4l6g | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.450 | |
| 1dz4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 1w6h | TIT | Plasmepsin-2 | 3.4.23.39 | 0.449 | |
| 1yrd | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 2g24 | 7IG | Renin | 3.4.23.15 | 0.449 | |
| 2g27 | 4LG | Renin | 3.4.23.15 | 0.449 | |
| 2il2 | LIX | Renin | 3.4.23.15 | 0.449 | |
| 3fwf | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.449 | |
| 1t87 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.448 | |
| 3fwj | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.447 | |
| 3own | 3OW | Renin | 3.4.23.15 | 0.446 | |
| 4exg | 916 | Beta-secretase 1 | 3.4.23.46 | 0.446 | |
| 4lht | CNL | 1,8-cineole 2-endo-monooxygenase | 1.14.13.156 | 0.446 | |
| 2i4q | UA4 | Renin | 3.4.23.15 | 0.445 | |
| 3l63 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.445 | |
| 4l4f | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.445 | |
| 5hs1 | VOR | Lanosterol 14-alpha demethylase | / | 0.445 | |
| 6cp4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.445 | |
| 1mok | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.444 | |
| 2qbn | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.443 | |
| 3vyf | VYF | Renin | 3.4.23.15 | 0.443 | |
| 2fs4 | PZ1 | Renin | 3.4.23.15 | 0.442 | |
| 4l4c | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.442 | |
| 2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.441 | |
| 2g1o | 2IG | Renin | 3.4.23.15 | 0.441 | |
| 2g1r | 3IG | Renin | 3.4.23.15 | 0.441 | |
| 3fwi | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 | |
| 4l4e | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 | |
| 5cp4 | CAM | Camphor 5-monooxygenase | 1.14.15.1 | 0.440 |