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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1go2FADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1go2FADFerredoxin--NADP reductase1.18.1.21.000
1qgyFADFerredoxin--NADP reductase1.18.1.20.755
1b2rFADFerredoxin--NADP reductase1.18.1.20.739
1h85FADFerredoxin--NADP reductase1.18.1.20.739
1qh0FADFerredoxin--NADP reductase1.18.1.20.719
1e64FADFerredoxin--NADP reductase1.18.1.20.681
1bjkFADFerredoxin--NADP reductase1.18.1.20.627
4c43FADFerredoxin--NADP reductase1.18.1.20.611
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.600
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.596
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.585
3zc3FADFerredoxin--NADP reductase1.18.1.20.580
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.569
3zbtFADFerredoxin--NADP reductase1.18.1.20.564
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.561
4bprFADFerredoxin--NADP reductase1.18.1.20.556
3w5uFADFerredoxin/0.552
1sm4FADFerredoxin--NADP reductase/0.551
1gjrFADFerredoxin--NADP reductase1.18.1.20.550
2b5oFADFerredoxin--NADP reductase1.18.1.20.549
3vo2FADFerredoxin--NADP reductase/0.547
1ewyFADFerredoxin--NADP reductase1.18.1.20.544
1gaqFADFerredoxin/0.537
1w87FADFerredoxin--NADP reductase1.18.1.20.534
1gawFADFerredoxin/0.529
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.525
1ja1FADNADPH--cytochrome P450 reductase/0.520
1ogjFADFerredoxin--NADP reductase1.18.1.20.520
1queFADFerredoxin--NADP reductase1.18.1.20.519
1e63FADFerredoxin--NADP reductase1.18.1.20.518
1w35FADFerredoxin--NADP reductase1.18.1.20.508
3qfsFADNADPH--cytochrome P450 reductase/0.506
1h42FADFerredoxin--NADP reductase1.18.1.20.505
2rc6FADFerredoxin--NADP reductase/0.505
4yaoFADNADPH--cytochrome P450 reductase/0.502
1amoFADNADPH--cytochrome P450 reductase/0.500
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.495
1e62FADFerredoxin--NADP reductase1.18.1.20.486
1gr1FADFerredoxin--NADP reductase1.18.1.20.485
2ok8FADFerredoxin--NADP reductase, apicoplast/0.485
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.477
1qgzFADFerredoxin--NADP reductase1.18.1.20.474
1cqxFADFlavohemoprotein/0.470
2rc5FADFerredoxin--NADP reductase/0.470
3fpkFADFerredoxin-NADP reductase/0.469
3qftFADNADPH--cytochrome P450 reductase/0.468
2vnjFADNADPH:ferredoxin reductase/0.461
1j9zFADNADPH--cytochrome P450 reductase/0.455
3ojxFADNADPH--cytochrome P450 reductase/0.452
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.450
2zevIPEGeranylgeranyl pyrophosphate synthase/0.447
4bfxZVXPantothenate kinase2.7.1.330.447
1tllFADNitric oxide synthase, brain1.14.13.390.445
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.442
1fdrFADFerredoxin--NADP reductase1.18.1.20.441
3n39FMNProtein NrdI/0.441
2bgiFADNADPH:ferredoxin reductase/0.440