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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1enzNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1enzNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
1enyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.635
4dreNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.599
2aqhNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.594
2aqkNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.582
3of2NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.581
3oewNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.577
2aqiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.572
3oeyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.556
2nv6ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.554
1bvrNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.548
4dtiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.535
2idzZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.534
4bgePYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.532
4biiPYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.525
5cpbNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.521
4bqpNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.508
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.500
4bgiI4IEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.496
1zidZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.486
2pr2DG1Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.476
2aq8NAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.467
4rlh0WEEnoyl-[acyl-carrier-protein] reductase [NADH]/0.466
2ntvP1HEnoyl-[acyl-carrier-protein] reductase [NADH]/0.462
1dhjMTXDihydrofolate reductase1.5.1.30.460
3h18PMSEsterase/lipase/0.442
4ubsDIFPentalenic acid synthase1.14.15.110.442
1og5SWFCytochrome P450 2C9/0.441