Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1e64FADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1e64FADFerredoxin--NADP reductase1.18.1.21.000
1qgyFADFerredoxin--NADP reductase1.18.1.20.776
1h85FADFerredoxin--NADP reductase1.18.1.20.764
1qh0FADFerredoxin--NADP reductase1.18.1.20.750
1bjkFADFerredoxin--NADP reductase1.18.1.20.725
1go2FADFerredoxin--NADP reductase1.18.1.20.708
1b2rFADFerredoxin--NADP reductase1.18.1.20.683
3zbtFADFerredoxin--NADP reductase1.18.1.20.638
1e63FADFerredoxin--NADP reductase1.18.1.20.632
4c43FADFerredoxin--NADP reductase1.18.1.20.630
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.615
2b5oFADFerredoxin--NADP reductase1.18.1.20.602
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.598
1e62FADFerredoxin--NADP reductase1.18.1.20.597
4bprFADFerredoxin--NADP reductase1.18.1.20.595
1queFADFerredoxin--NADP reductase1.18.1.20.593
3w5uFADFerredoxin/0.589
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.585
1ewyFADFerredoxin--NADP reductase1.18.1.20.575
1h42FADFerredoxin--NADP reductase1.18.1.20.575
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.574
1ogiFADFerredoxin--NADP reductase1.18.1.20.570
3zc3FADFerredoxin--NADP reductase1.18.1.20.570
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.570
3vo2FADFerredoxin--NADP reductase/0.565
1qgzFADFerredoxin--NADP reductase1.18.1.20.564
1gawFADFerredoxin/0.563
1sm4FADFerredoxin--NADP reductase/0.560
1gjrFADFerredoxin--NADP reductase1.18.1.20.559
1ogjFADFerredoxin--NADP reductase1.18.1.20.558
1gr1FADFerredoxin--NADP reductase1.18.1.20.550
1w35FADFerredoxin--NADP reductase1.18.1.20.549
2rc6FADFerredoxin--NADP reductase/0.549
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.546
1w87FADFerredoxin--NADP reductase1.18.1.20.545
3fpkFADFerredoxin-NADP reductase/0.534
3qfsFADNADPH--cytochrome P450 reductase/0.531
1gaqFADFerredoxin/0.529
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.524
1j9zFADNADPH--cytochrome P450 reductase/0.508
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.506
4yaoFADNADPH--cytochrome P450 reductase/0.506
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.505
1ja1FADNADPH--cytochrome P450 reductase/0.504
2ok8FADFerredoxin--NADP reductase, apicoplast/0.496
1amoFADNADPH--cytochrome P450 reductase/0.493
1tllFADNitric oxide synthase, brain1.14.13.390.486
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.484
3qe2FADNADPH--cytochrome P450 reductase/0.484
4fk8FADFerredoxin--NADP reductase/0.484
1f20FADNitric oxide synthase, brain1.14.13.390.481
5ah5LSSLeucine--tRNA ligase/0.470
2rc5FADFerredoxin--NADP reductase/0.469
1fdrFADFerredoxin--NADP reductase1.18.1.20.465
3qftFADNADPH--cytochrome P450 reductase/0.463
1a8pFADFerredoxin--NADP reductase/0.457
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.456
3qfcFADNADPH--cytochrome P450 reductase/0.453
5c6cCMPcGMP-dependent protein kinase 22.7.11.120.453
1fxsNAPGDP-L-fucose synthase/0.449
2bgiFADNADPH:ferredoxin reductase/0.449
1z41FMNNADPH dehydrogenase/0.447
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.447
2wp9CBESuccinate dehydrogenase iron-sulfur subunit1.3.5.10.446
2wp9CBESuccinate dehydrogenase cytochrome b556 subunit/0.446
2ewmNAD(S)-1-Phenylethanol dehydrogenase1.1.1.3110.445
3jyoNADQuinate/shikimate dehydrogenase (NAD(+))/0.445
3u8l09QAcetylcholine-binding protein/0.445
3af1GDPPantothenate kinase2.7.1.330.444
3gncQQQGlutaryl-CoA dehydrogenase/0.444
1bsvNDPGDP-L-fucose synthase/0.443
2x1eX1EAcyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form2.3.1.1640.443
2z7hGG3Geranylgeranyl pyrophosphate synthase/0.443
5bt9NAP3-oxoacyl-(Acyl-carrier-protein) reductase/0.443
1cqxFADFlavohemoprotein/0.442
2jl1NAPTriphenylmethane reductase/0.442
3fvlBHKCarboxypeptidase A13.4.17.10.442
3q43D66M1 family aminopeptidase3.4.110.441
4bfsZVSPantothenate kinase2.7.1.330.441
4rn615UProthrombin3.4.21.50.441
4b68FADL-ornithine N(5)-monooxygenase/0.440