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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1b38ATPCyclin-dependent kinase 22.7.11.22

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1b38ATPCyclin-dependent kinase 22.7.11.221.000
1w8cN69Cyclin-dependent kinase 22.7.11.220.547
3r83Z14Cyclin-dependent kinase 22.7.11.220.530
2a4lRRCCyclin-dependent kinase 22.7.11.220.520
3lfqA28Cyclin-dependent kinase 22.7.11.220.517
4fkg4CKCyclin-dependent kinase 22.7.11.220.517
4fklCK2Cyclin-dependent kinase 22.7.11.220.512
1hckATPCyclin-dependent kinase 22.7.11.220.511
4fkt48KCyclin-dependent kinase 22.7.11.220.497
1oirHDYCyclin-dependent kinase 22.7.11.220.495
1b39ATPCyclin-dependent kinase 22.7.11.220.494
2c6o4SPCyclin-dependent kinase 22.7.11.220.493
1pxlCK4Cyclin-dependent kinase 22.7.11.220.491
3qwjX6ACyclin-dependent kinase 22.7.11.220.487
1e1xNW1Cyclin-dependent kinase 22.7.11.220.486
1ke5LS1Cyclin-dependent kinase 22.7.11.220.481
4fki09KCyclin-dependent kinase 22.7.11.220.481
2exmZIPCyclin-dependent kinase 22.7.11.220.479
4ek816KCyclin-dependent kinase 22.7.11.220.477
3iggEFQCyclin-dependent kinase 22.7.11.220.473
3lfnA27Cyclin-dependent kinase 22.7.11.220.473
2a0cCK9Cyclin-dependent kinase 22.7.11.220.472
2r3jSCJCyclin-dependent kinase 22.7.11.220.468
4ek610KCyclin-dependent kinase 22.7.11.220.468
2btrU73Cyclin-dependent kinase 22.7.11.220.467
2btsU32Cyclin-dependent kinase 22.7.11.220.467
3qzgX67Cyclin-dependent kinase 22.7.11.220.466
4kd11QKCyclin-dependent kinase 22.7.11.220.466
1y91CT9Cyclin-dependent kinase 22.7.11.220.464
3r8lZ30Cyclin-dependent kinase 22.7.11.220.464
4fkj11KCyclin-dependent kinase 22.7.11.220.463
1pxoCK7Cyclin-dependent kinase 22.7.11.220.462
4fkq42KCyclin-dependent kinase 22.7.11.220.462
3qqhX0ACyclin-dependent kinase 22.7.11.220.461
1w0xOLOCyclin-dependent kinase 22.7.11.220.459
3rahO1ZCyclin-dependent kinase 22.7.11.220.457
3rpo24ZCyclin-dependent kinase 22.7.11.220.457
1oitHDTCyclin-dependent kinase 22.7.11.220.456
3r8vZ62Cyclin-dependent kinase 22.7.11.220.456
3r1yX76Cyclin-dependent kinase 22.7.11.220.455
1pxmCK5Cyclin-dependent kinase 22.7.11.220.454
2uzoC62Cyclin-dependent kinase 22.7.11.220.454
1ykr628Cyclin-dependent kinase 22.7.11.220.453
2uznC96Cyclin-dependent kinase 22.7.11.220.453
3r7yZ04Cyclin-dependent kinase 22.7.11.220.453
3qqlX03Cyclin-dependent kinase 22.7.11.220.452
2j9mPY8Cyclin-dependent kinase 22.7.11.220.451
3qu0X40Cyclin-dependent kinase 22.7.11.220.451
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.447
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.447
4fkpLS5Cyclin-dependent kinase 22.7.11.220.447
2r3gSC9Cyclin-dependent kinase 22.7.11.220.445
2xmyCDKCyclin-dependent kinase 22.7.11.220.444
3ezvEZVCyclin-dependent kinase 22.7.11.220.443
3rak03ZCyclin-dependent kinase 22.7.11.220.443
2b52D42Cyclin-dependent kinase 22.7.11.220.442