Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
7mhtSAHModification methylase HhaI2.1.1.37

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
7mhtSAHModification methylase HhaI2.1.1.371.000
5mhtSAHModification methylase HhaI2.1.1.370.628
2zcjSAHModification methylase HhaI2.1.1.370.625
9mhtSAHModification methylase HhaI2.1.1.370.616
1skmSAHModification methylase HhaI2.1.1.370.594
2z6uSAHModification methylase HhaI2.1.1.370.580
8mhtSAHModification methylase HhaI2.1.1.370.568
2uyhSAHModification methylase HhaI2.1.1.370.563
1fjxSAHModification methylase HhaI2.1.1.370.561
3mhtSAHModification methylase HhaI2.1.1.370.559
2c7qSAHModification methylase HhaI2.1.1.370.557
4mhtSAHModification methylase HhaI2.1.1.370.548
1mhtSAHModification methylase HhaI2.1.1.370.546
2i9kSAHModification methylase HhaI2.1.1.370.533
10mhSAHModification methylase HhaI2.1.1.370.514
2hmySAMModification methylase HhaI2.1.1.370.488