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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
6coxS58Prostaglandin G/H synthase 21.14.99.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
6coxS58Prostaglandin G/H synthase 21.14.99.11.000
3ln1CELProstaglandin G/H synthase 21.14.99.10.605
4coxIMNProstaglandin G/H synthase 21.14.99.10.594
3rr3FLRProstaglandin G/H synthase 21.14.99.10.569
1cx2S58Prostaglandin G/H synthase 21.14.99.10.563
2oyuIMSProstaglandin G/H synthase 11.14.99.10.534
3kk6CELProstaglandin G/H synthase 11.14.99.10.518
3mqe416Prostaglandin G/H synthase 21.14.99.10.516
2oyeIM8Prostaglandin G/H synthase 11.14.99.10.514
4rrwLURProstaglandin G/H synthase 21.14.99.10.511
4rrzLURProstaglandin G/H synthase 21.14.99.10.511
5ikqJMSProstaglandin G/H synthase 21.14.99.10.509
4rrxLURProstaglandin G/H synthase 21.14.99.10.508
4fm5DF0Prostaglandin G/H synthase 21.14.99.10.495
4otyLURProstaglandin G/H synthase 21.14.99.10.487
1eqgIBPProstaglandin G/H synthase 11.14.99.10.477
3q7dNPXProstaglandin G/H synthase 21.14.99.10.477
5ikrID8Prostaglandin G/H synthase 21.14.99.10.465
1pxxDIFProstaglandin G/H synthase 21.14.99.10.462
3n8wFLPProstaglandin G/H synthase 11.14.99.10.462
3ln052BProstaglandin G/H synthase 21.14.99.10.459
1q4gBFLProstaglandin G/H synthase 11.14.99.10.452
2aylFLPProstaglandin G/H synthase 11.14.99.10.448
4ph9IBPProstaglandin G/H synthase 21.14.99.10.448
3n8xNIMProstaglandin G/H synthase 11.14.99.10.441
1ht834CProstaglandin G/H synthase 11.14.99.10.440