scPDB - Distribution of Binding site Similarity values of 5mht entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
5mht	SAH	Modification methylase HhaI	2.1.1.37

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
5mht	SAH	Modification methylase HhaI	2.1.1.37	1.000
8mht	SAH	Modification methylase HhaI	2.1.1.37	0.752
7mht	SAH	Modification methylase HhaI	2.1.1.37	0.681
2uyh	SAH	Modification methylase HhaI	2.1.1.37	0.655
4mht	SAH	Modification methylase HhaI	2.1.1.37	0.633
9mht	SAH	Modification methylase HhaI	2.1.1.37	0.626
2z6u	SAH	Modification methylase HhaI	2.1.1.37	0.621
1skm	SAH	Modification methylase HhaI	2.1.1.37	0.601
2c7q	SAH	Modification methylase HhaI	2.1.1.37	0.598
2zcj	SAH	Modification methylase HhaI	2.1.1.37	0.585
10mh	SAH	Modification methylase HhaI	2.1.1.37	0.584
1mht	SAH	Modification methylase HhaI	2.1.1.37	0.580
2i9k	SAH	Modification methylase HhaI	2.1.1.37	0.572
3mht	SAH	Modification methylase HhaI	2.1.1.37	0.564
1fjx	SAH	Modification methylase HhaI	2.1.1.37	0.562
2hmy	SAM	Modification methylase HhaI	2.1.1.37	0.507