scPDB - Distribution of Binding site Similarity values of 5j4e entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
5j4e	FMN	Sensory box protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
5j4e	FMN	Sensory box protein	/	1.000
5j3w	FMN	Sensory box protein	/	0.789
3sw1	FMN	Sensory box protein	/	0.492
4hj4	FMN	LOV protein	/	0.450
4hia	FMN	LOV protein	/	0.448