Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
5fdg | 0N8 | Polymerase acidic protein |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
5fdg | 0N8 | Polymerase acidic protein | / | 1.000 | |
4e5h | 0N8 | Polymerase acidic protein | / | 0.589 | |
4avg | SL6 | Polymerase acidic protein | / | 0.543 | |
4awk | CI1 | Polymerase acidic protein | / | 0.540 | |
4awm | KDH | Polymerase acidic protein | / | 0.531 | |
4e5f | 0N7 | Polymerase acidic protein | / | 0.531 | |
5d9j | 0N8 | Polymerase acidic protein | / | 0.527 | |
4awg | CI3 | Polymerase acidic protein | / | 0.494 | |
4e5l | DBH | Polymerase acidic protein | / | 0.485 | |
5ccy | TMP | Polymerase acidic protein | / | 0.462 | |
5d4g | U5P | Polymerase acidic protein | / | 0.462 | |
4e5i | 0N9 | Polymerase acidic protein | / | 0.448 |