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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
5cdtNAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
5cdtNAJAlcohol dehydrogenase E chain1.1.1.11.000
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.821
4nfsNAJAlcohol dehydrogenase E chain1.1.1.10.755
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.750
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.750
1hetNADAlcohol dehydrogenase E chain1.1.1.10.696
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.683
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.671
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.668
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.663
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.658
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.658
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.653
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.648
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.646
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.645
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.643
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.638
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.637
1heuNADAlcohol dehydrogenase E chain1.1.1.10.631
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.614
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.608
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.607
1a71NADAlcohol dehydrogenase E chain1.1.1.10.603
1adcPADAlcohol dehydrogenase E chain1.1.1.10.598
1hszNADAlcohol dehydrogenase 1B1.1.1.10.597
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.593
1axgNADAlcohol dehydrogenase E chain1.1.1.10.588
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.587
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.584
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.581
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.579
1hldNADAlcohol dehydrogenase E chain1.1.1.10.574
6adhNADAlcohol dehydrogenase E chain1.1.1.10.564
3jv7NADSecondary alcohol dehydrogenase/0.553
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.544
1axeNADAlcohol dehydrogenase E chain1.1.1.10.542
4cpdNADAlcohol dehydrogenase/0.530
4rquNADAlcohol dehydrogenase class-P/0.529
1mp0NADAlcohol dehydrogenase class-31.1.1.10.521
1ma0NADAlcohol dehydrogenase class-31.1.1.10.516
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.515
4c4oNADSADH/0.513
2dphNADFormaldehyde dismutase/0.510
1e3lNADAlcohol dehydrogenase 41.1.1.10.509
3wleNAD(R)-specific carbonyl reductase/0.509
3cosNADAlcohol dehydrogenase 41.1.1.10.507
1h2bNAJNAD-dependent alcohol dehydrogenase/0.506
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.501
4jjiNADAlcohol dehydrogenase class-3/0.501
4gl4NAIAlcohol dehydrogenase class-3/0.497
1kolNADGlutathione-independent formaldehyde dehydrogenase/0.494
4gkvNADAlcohol dehydrogenase, propanol-preferring1.1.1.10.493
2xaaNADSecondary alcohol dehydrogenase/0.492
2fzwNADAlcohol dehydrogenase class-31.1.1.10.491
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.484
1e3eNAIAlcohol dehydrogenase 41.1.1.10.483
1f8fNADBenzyl alcohol dehydrogenase/0.482
5jlaNADPutative short-chain dehydrogenase/reductase/0.480
1cdoNADAlcohol dehydrogenase 11.1.1.10.479
3twoNDPMannitol dehydrogenase/0.478
1a72PADAlcohol dehydrogenase E chain1.1.1.10.476
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.474
1lluNADAlcohol dehydrogenase/0.471
1r37NADNAD-dependent alcohol dehydrogenase1.1.1.10.466
1tehNADAlcohol dehydrogenase class-31.1.1.10.452
5adhAPRAlcohol dehydrogenase E chain1.1.1.10.451
4w6z8IDAlcohol dehydrogenase 11.1.1.10.449
1ipeNDPTropinone reductase 21.1.1.2360.445
4qedNAPElxO/0.444
5js6NAD17-beta-hydroxysteroid dehydrogenase 141.1.10.444
2d1yNADOxidoreductase, short-chain dehydrogenase/reductase family/0.442
4qecNAPElxO/0.442
5envNADAlcohol dehydrogenase 11.1.1.10.442
1adfTADAlcohol dehydrogenase E chain1.1.1.10.441
1tj0FADBifunctional protein PutA1.5.5.20.441
4oknNAIL-lactate dehydrogenase A chain1.1.1.270.441
3wdsNADNADH-dependent quinuclidinone reductase/0.440
4j7uNAPSepiapterin reductase1.1.1.1530.440