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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
5cdsNAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
5cdsNAJAlcohol dehydrogenase E chain1.1.1.11.000
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.693
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.678
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.674
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.665
1a71NADAlcohol dehydrogenase E chain1.1.1.10.649
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.647
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.646
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.637
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.630
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.629
1axeNADAlcohol dehydrogenase E chain1.1.1.10.620
1adcPADAlcohol dehydrogenase E chain1.1.1.10.618
1axgNADAlcohol dehydrogenase E chain1.1.1.10.613
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.604
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.602
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.600
1hldNADAlcohol dehydrogenase E chain1.1.1.10.597
1hszNADAlcohol dehydrogenase 1B1.1.1.10.594
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.593
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.590
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.587
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.554
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.548
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.539
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.537
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.521
4c4oNADSADH/0.519
4cpdNADAlcohol dehydrogenase/0.517
1ma0NADAlcohol dehydrogenase class-31.1.1.10.514
4gkvNADAlcohol dehydrogenase, propanol-preferring1.1.1.10.504
1heuNADAlcohol dehydrogenase E chain1.1.1.10.502
1kolNADGlutathione-independent formaldehyde dehydrogenase/0.501
1hdzNADAlcohol dehydrogenase 1B1.1.1.10.500
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.500
4gl4NAIAlcohol dehydrogenase class-3/0.499
4jjiNADAlcohol dehydrogenase class-3/0.499
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.499
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.495
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.493
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.491
1e3lNADAlcohol dehydrogenase 41.1.1.10.490
1cdoNADAlcohol dehydrogenase 11.1.1.10.488
3jv7NADSecondary alcohol dehydrogenase/0.485
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.481
2xaaNADSecondary alcohol dehydrogenase/0.478
5envNADAlcohol dehydrogenase 11.1.1.10.473
1h2bNAJNAD-dependent alcohol dehydrogenase/0.471
3twoNDPMannitol dehydrogenase/0.466
2dphNADFormaldehyde dismutase/0.465
4wluNADMalate dehydrogenase, mitochondrial1.1.1.370.462
4w6z8IDAlcohol dehydrogenase 11.1.1.10.460
3ukoNADAlcohol dehydrogenase class-3/0.458
4wloNAIMalate dehydrogenase, mitochondrial1.1.1.370.456
4wlvNADMalate dehydrogenase, mitochondrial1.1.1.370.456
1lluNADAlcohol dehydrogenase/0.455
6adhNADAlcohol dehydrogenase E chain1.1.1.10.453
1f8fNADBenzyl alcohol dehydrogenase/0.448