Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
5c8r | UPG | Histo-blood group ABO system transferase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
5c8r | UPG | Histo-blood group ABO system transferase | / | 1.000 | |
5c1l | GDU | Histo-blood group ABO system transferase | / | 0.651 | |
5c3b | URM | Histo-blood group ABO system transferase | / | 0.592 | |
5c47 | URM | Histo-blood group ABO system transferase | / | 0.573 | |
5c1h | GDU | Histo-blood group ABO system transferase | / | 0.553 | |
5c48 | URM | Histo-blood group ABO system transferase | / | 0.547 | |
5c1g | GDU | Histo-blood group ABO system transferase | / | 0.521 | |
5c4b | UPG | Histo-blood group ABO system transferase | / | 0.483 | |
3v0m | 5GW | Histo-blood group ABO system transferase | / | 0.466 | |
5c3a | URM | Histo-blood group ABO system transferase | / | 0.456 | |
1g93 | UPG | N-acetyllactosaminide alpha-1,3-galactosyltransferase | / | 0.452 | |
3v0o | 4GW | Histo-blood group ABO system transferase | / | 0.451 |