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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
5bt9NAP3-oxoacyl-(Acyl-carrier-protein) reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
5bt9NAP3-oxoacyl-(Acyl-carrier-protein) reductase/1.000
3bmoNAPPteridine reductase/0.556
3h4vNAPPteridine reductase 11.5.1.330.486
4cloNAPPteridine reductase/0.486
2bfoNDPPteridine reductase 11.5.1.330.485
2getCOKPantothenate kinase2.7.1.330.476
4id9NADPutative UDP-glucose 4-epimerase/0.472
2gesCOKPantothenate kinase2.7.1.330.467
4esoNAPPutative oxidoreductase/0.466
4idgNADPutative UDP-glucose 4-epimerase/0.461
2zsdCOAPantothenate kinase2.7.1.330.458
1nuqNXXNicotinamide/nicotinic acid mononucleotide adenylyltransferase 3/0.454
4bfyZVYPantothenate kinase2.7.1.330.448
1nuuNADNicotinamide/nicotinic acid mononucleotide adenylyltransferase 3/0.447
1g6kNADGlucose 1-dehydrogenase1.1.1.470.443
5jsfNAD17-beta-hydroxysteroid dehydrogenase 141.1.10.443
2geuCOKPantothenate kinase2.7.1.330.442
2q1sNAIPutative nucleotide sugar epimerase/ dehydratase/0.442