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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4zweDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4zweDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4to6TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.569
4rxrDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.565
4qg1DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.554
4to3DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.535
4qfyDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.534
4tnyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.529
4to5DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.524
4qg0DUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.513
4rxpDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.495
4rxsTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.495
4to1DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.491
4to4DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.491
4bzbDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.490
4rxqDUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.476
4tnzTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.452