scPDB - Distribution of Binding site Similarity values of 4wh3 entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4wh3	ATP	N-acetylhexosamine 1-kinase	2.7.1.162

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4wh3	ATP	N-acetylhexosamine 1-kinase	2.7.1.162	1.000
4wh2	ADP	N-acetylhexosamine 1-kinase	2.7.1.162	0.536
4ocv	ANP	Aminoglycoside phosphotransferase	/	0.497
4ock	ANP	N-acetylhexosamine 1-kinase	2.7.1.162	0.492
4ocp	ADP	N-acetylhexosamine 1-kinase	2.7.1.162	0.465