scPDB - Distribution of Binding site Similarity values of 4v02 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4v02	ATP	Site-determining protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4v02	ATP	Site-determining protein	/	1.000
4e03	ADP	Plasmid partitioning protein ParF	/	0.480
5k5z	ANP	Uncharacterized protein	/	0.465
3fwy	ADP	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein	/	0.460
4dzz	ADP	Plasmid partitioning protein ParF	/	0.458
3c14	GSP	Guanine nucleotide-binding protein G(s) subunit alpha isoforms short	/	0.452
2yj5	ATP	Copper-transporting ATPase	/	0.442