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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4utlFNRXenobiotic reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4utlFNRXenobiotic reductase/1.000
4utkFNRXenobiotic reductase/0.610
3n19FNRXenobiotic reductase/0.581
3l5lFMNXenobiotic reductase/0.558
1icqFMN12-oxophytodienoate reductase 11.3.1.420.523
3hgrFMN12-oxophytodienoate reductase 11.3.1.420.516
1icsFMN12-oxophytodienoate reductase 11.3.1.420.514
4uthFMNXenobiotic reductase/0.509
1vyrFMNPentaerythritol tetranitrate reductase/0.506
3hgoFMN12-oxophytodienoate reductase 31.3.1.420.504
3hgsFMN12-oxophytodienoate reductase 31.3.1.420.503
4tmbFMNOld yellow enzyme/0.501
1z44FMNNADPH dehydrogenase/0.497
2abbFMNPentaerythritol tetranitrate reductase/0.495
1h50FMNPentaerythritol tetranitrate reductase/0.494
3f03FMNPentaerythritol tetranitrate reductase/0.494
3p84FMNPentaerythritol tetranitrate reductase/0.494
4a3uFMNNADH:flavin oxidoreductase/NADH oxidase/0.493
1vjiFMN12-oxophytodienoate reductase 11.3.1.420.487
4b5nFMNNAD(P)H:flavin oxidoreductase Sye4/0.485
4rnvFMNNADPH dehydrogenase 11.6.99.10.484
2hs8FMN12-oxophytodienoate reductase 31.3.1.420.481
3n14FMNXenobiotic reductase/0.480
3p8jFMNPentaerythritol tetranitrate reductase/0.479
1icpFMN12-oxophytodienoate reductase 11.3.1.420.470
1h63FMNPentaerythritol tetranitrate reductase/0.464
1q45FMN12-oxophytodienoate reductase 31.3.1.420.459
2h8xFMNXenA/0.459
3p74FMNPentaerythritol tetranitrate reductase/0.458
3tjlFMNNADPH dehydrogenase/0.448
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.442
3p67FMNPentaerythritol tetranitrate reductase/0.441