scPDB - Distribution of Binding site Similarity values of 4typ entry / Site 4

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4typ	AP5	Adenylate kinase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4typ	AP5	Adenylate kinase	/	1.000
4mkh	AP5	Adenylate kinase	/	0.534
4qbf	AP5	Adenylate kinase	/	0.507
1zio	AP5	Adenylate kinase	/	0.499
2qaj	AP5	Adenylate kinase	/	0.489
3hpr	AP5	Adenylate kinase	/	0.461
2eu8	AP5	Adenylate kinase	/	0.460
1e4v	AP5	Adenylate kinase	/	0.453
4tyq	AP5	Adenylate kinase	/	0.449