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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4to0DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4to0DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4tnpDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.595
4tnrDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.582
4tnqTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.570
4tnzDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.566
4to4DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.538
4to5TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.532
4zwgDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.513
4to6DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.508
4qfyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.502
4tnxDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.477
4tnyDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.464
4qfxDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.459
4bzcT8TDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.450