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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4tnxDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4tnxDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4tnqTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.585
4tnrDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.573
4tnzDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.567
4tnpDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.560
4to0DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.553
4to4DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.549
4qfxDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.488
4to5TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.483
4to6DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.480
4to3DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.464
4qfyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.458
4tnyDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.454
4zwgDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.446