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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4tnpDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4tnpDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4tnrDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.640
4to0DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.614
4tnzDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.596
4tnqTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.581
4to5TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.523
4qfyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.521
4zwgDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.508
4to4DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.507
4tnxDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.506
4qfxDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.464
4tnyDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.460
4bzcT8TDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.450