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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4rxqDUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.5

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4rxqDUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.51.000
4rxpDTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.801
4rxrDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.672
4rxsTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.625
4to1DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.554
4tnyDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.553
4qfyDCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.552
4to5DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.550
4qg1DTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.532
4to4DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.530
4qg0DUTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.525
4to3DCPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.502
4to6TTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.501
4zweDGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.490
4qfzTTPDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.468
4to2DGTDeoxynucleoside triphosphate triphosphohydrolase SAMHD13.1.50.466