scPDB - Distribution of Binding site Similarity values of 4opi entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4opi	FDA	Conserved Archaeal protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4opi	FDA	Conserved Archaeal protein	/	1.000
4opg	FDA	Conserved Archaeal protein	/	0.653
4opl	FDA	Conserved Archaeal protein	/	0.636
4opu	FDA	Conserved Archaeal protein	/	0.538
2ylz	FAD	Phenylacetone monooxygenase	1.14.13.92	0.483
1w4x	FAD	Phenylacetone monooxygenase	1.14.13.92	0.459
3em0	CHD	Fatty acid-binding protein 6, ileal (gastrotropin)	/	0.452
1grb	FAD	Glutathione reductase, mitochondrial	1.8.1.7	0.441
2cf6	NAP	Cinnamyl alcohol dehydrogenase 5	1.1.1.195	0.441
4amb	DUD	Putative glycosyl transferase	/	0.440