scPDB - Distribution of Binding site Similarity values of 4opd entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4opd	FDA	Conserved Archaeal protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4opd	FDA	Conserved Archaeal protein	/	1.000
3atr	FDA	Conserved Archaeal protein	/	0.636
4opc	FDA	Conserved Archaeal protein	/	0.635
3atq	FDA	Conserved Archaeal protein	/	0.618
4opt	FDA	Conserved Archaeal protein	/	0.595