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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4n4v2GYTankyrase-12.4.2.30

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4n4v2GYTankyrase-12.4.2.301.000
4mt92D6Tankyrase-12.4.2.300.684
4n4t2GVTankyrase-12.4.2.300.588
4msg2C6Tankyrase-12.4.2.300.551
4hyf1AKTankyrase-22.4.2.300.543
4k4fK4FTankyrase-12.4.2.300.528
4bfpSWYTankyrase-22.4.2.300.525
4li71XPTankyrase-12.4.2.300.521
4bj9UHBTankyrase-22.4.2.300.520
4li81XQTankyrase-12.4.2.300.520
4k4eK4ETankyrase-12.4.2.300.512
4dvi2IWTankyrase-12.4.2.300.504
4tkg09LTankyrase-22.4.2.300.493
3u9y09LTankyrase-22.4.2.300.482
4i9i1DYTankyrase-12.4.2.300.470
4n3r2GUTankyrase-12.4.2.300.458
2xvfFADPutative flavin-containing monooxygenase/0.449
4bb3KKAIsopenicillin N synthase1.21.3.10.445
4msk2C8Tankyrase-12.4.2.300.445