scPDB - Distribution of Binding site Similarity values of 4mpr entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4mpr	TPP	Benzoylformate decarboxylase	4.1.1.7

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4mpr	TPP	Benzoylformate decarboxylase	4.1.1.7	1.000
4gm4	TZD	Benzoylformate decarboxylase	4.1.1.7	0.873
4gg1	TZD	Benzoylformate decarboxylase	4.1.1.7	0.781
3fzn	D7K	Benzoylformate decarboxylase	4.1.1.7	0.656
1po7	TZD	Benzoylformate decarboxylase	4.1.1.7	0.640
1mcz	TDP	Benzoylformate decarboxylase	4.1.1.7	0.626
4k9n	TZD	Benzoylformate decarboxylase	4.1.1.7	0.623
4k9o	TPP	Benzoylformate decarboxylase	4.1.1.7	0.607
4juf	TPP	Benzoylformate decarboxylase	4.1.1.7	0.593
4jub	TPP	Benzoylformate decarboxylase	4.1.1.7	0.584
4qel	TZD	Benzoylformate decarboxylase	4.1.1.7	0.573
4jd5	TZD	Benzoylformate decarboxylase	4.1.1.7	0.570
4gm0	TZD	Benzoylformate decarboxylase	4.1.1.7	0.563
4juc	TPP	Benzoylformate decarboxylase	4.1.1.7	0.555
4mq5	TPP	Benzoylformate decarboxylase	4.1.1.7	0.554
4k9p	TPP	Benzoylformate decarboxylase	4.1.1.7	0.545
2v3w	TPP	Benzoylformate decarboxylase	4.1.1.7	0.542
4ju8	TZD	Benzoylformate decarboxylase	4.1.1.7	0.517
2fwn	TDP	Benzoylformate decarboxylase	4.1.1.7	0.510
1bfd	TPP	Benzoylformate decarboxylase	4.1.1.7	0.489
5dgt	TZD	Benzoylformate decarboxylase	4.1.1.7	0.482
4mpp	TZD	Benzoylformate decarboxylase	4.1.1.7	0.461
4ju9	TZD	Benzoylformate decarboxylase	4.1.1.7	0.459
4mzx	TZD	Benzoylformate decarboxylase	4.1.1.7	0.451