scPDB - Distribution of Binding site Similarity values of 4mm4 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4mm4	8PR	Na(+):neurotransmitter symporter (Snf family)

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4mm4	8PR	Na(+):neurotransmitter symporter (Snf family)	/	1.000
4mm9	FVX	Na(+):neurotransmitter symporter (Snf family)	/	0.658
4mm7	29J	Na(+):neurotransmitter symporter (Snf family)	/	0.651
4mme	29Q	Na(+):neurotransmitter symporter (Snf family)	/	0.586
4mmc	29J	Na(+):neurotransmitter symporter (Snf family)	/	0.573
4mmf	29Q	Na(+):neurotransmitter symporter (Snf family)	/	0.519
4mmd	29E	Na(+):neurotransmitter symporter (Snf family)	/	0.518
4m48	21B	Sodium-dependent dopamine transporter	/	0.454