scPDB - Distribution of Binding site Similarity values of 4l4s entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4l4s	NAI	L-lactate dehydrogenase A chain	1.1.1.27

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4l4s	NAI	L-lactate dehydrogenase A chain	1.1.1.27	1.000
2a92	NAI	L-lactate dehydrogenase	/	0.483
4ajp	88N	L-lactate dehydrogenase A chain	1.1.1.27	0.465
2aa3	AP0	L-lactate dehydrogenase	/	0.454
4ajo	88N	L-lactate dehydrogenase A chain	1.1.1.27	0.451
1ie3	NAD	Malate dehydrogenase	/	0.444
4nd2	A3D	Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase	/	0.440